Gene Shewmr4_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2887 
Symbol 
ID4253458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3448051 
End bp3448431 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content48% 
IMG OID638119522 
Producthypothetical protein 
Protein accessionYP_735015 
Protein GI113971222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.884859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.27359e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGA CTGTTAAAAC CTTTGCAGAA GCCGCTGGCA TGACTCCAGA AGGTCGTTAC 
GATTACCTCG TTGAACAAGT TAAACAACAC AAAGTGTTAT GGACGCTACA GGACCAAGAT
GGTTGCGTCA TGCTGACCAC AGAAGATGAA GATTGCATCC CAATGTGGCC AACCGAAGAA
GCGGCCGAGT CTTGGGCAGT CGATGACTGG AGCGAATGCC AAACCTTAGC GATTCCCTAT
GATGAATGGC ATGACAGATG GGTTCCTGGC ATGGAAGAAG ACGACCTGTT CGTTGCCGTA
TTCCCAGTAC AGGATGACTT AGGTGTGGTG ATCCCACCCT ATGAATTAGA TCAACGTTTA
GTTACTAAAC AAAGCCACTA A
 
Protein sequence
MSKTVKTFAE AAGMTPEGRY DYLVEQVKQH KVLWTLQDQD GCVMLTTEDE DCIPMWPTEE 
AAESWAVDDW SECQTLAIPY DEWHDRWVPG MEEDDLFVAV FPVQDDLGVV IPPYELDQRL
VTKQSH