| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2880 |
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| Symbol | |
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| ID | 4253451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3434242 |
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| End bp | 3435468 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119515 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_735008 |
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| Protein GI | 113971215 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000396777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000268729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCATGG CCTTAGGAGT CCCCGCCGAG ATGGCTGATT TAGACCAAGT ATTAGCAGAA
ATTAGACGTG GTACCGATGA GATCCTACTC GAATCGGATC TGCTGGAAAA ACTCAAAGAA
GGACGTCCAC TTCGTATCAA GTTAGGCGCT GATCCTACCG CACCGGATAT CCATCTTGGA
CACACAGTAA TTTTAAATAA ATTAAGATTA TTCCAAGAGT TAGGTCATGA AGTCATTTTC
TTAATTGGTG ACTTTACCGG TATGGTGGGT GATCCAAGTG GTAAAAACAG CACGCGTCCA
CCCCTCACCC GTGAGCAAGT ATTAGCCAAC GCTGAGACCT ATAAAGAGCA GGTCTATAAA
ATTCTGGATC CTGCAAAAAC CCGTATTGAG TTCAACTCGA GCTGGTTAGA GCCATTAGGC
GCAGCGGGGA TGATCCGTTT AGCCTCGCAG CAAACCGTTG CTCGTATGAT GGAACGTGAC
GACTTTAAGA AGCGCTATGC TTCGGGTCAG TCGATCGCTA TCCACGAATT TATGTACCCA
CTTTTACAGG GTTATGACTC AGTAGCCCTG AAGGCCGACG TTGAATTAGG CGGAACCGAC
CAGAAGTTCA ACCTGTTGAT GGGCCGTGAG TTACAAAAAG CCGAAGGCCA AAAACCACAA
GCCGTGATCA TGATGCCACT GCTCGAAGGT TTAGACGGCG TGAAGAAAAT GTCTAAATCG
GCGCACAACT ACATTGGTGT GAGTGAGCCC GCCAATGAAA TGTTTGGCAA GATCATGTCG
ATTTCTGACG AATTAATGTG GCGTTACTTT GAGCTGCTGT CATTCCGTCC TTTGGCCGAG
ATTGAACAGT TCAAACAAGA TATCGCCAAC GGTGCTAACC CGCGTGATAC CAAGATTGCG
CTCGCGAAGG AAATTATCGC GCGCTTCCAC GACCAAGCGG CGGCCGAGAG TGCCCATCAA
GCCTTTATCG ACCGTTTCCA AAAGGGCGCT ATCCCAGATG ATATCCCTGA GGTTGAATTA
GCTGCGGGTG AAGGCTTAGC GATTGCTAAC TTACTTAAAG ATGCCGACTT AGTGGGTTCG
ACTTCCGATG CGATGCGTAT GATCAAGCAA AGCGCGGTGA AGATGGACGG TGAGAAGGTT
GACGATAGCC GTATGACCTT AAGCGCTGGC ACGGTTGCCG TATTCCAAGT CGGTAAGCGT
AAGTTCGCGA AAGTGACTCT GGTTTAA
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| Protein sequence | MIMALGVPAE MADLDQVLAE IRRGTDEILL ESDLLEKLKE GRPLRIKLGA DPTAPDIHLG
HTVILNKLRL FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK
ILDPAKTRIE FNSSWLEPLG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP
LLQGYDSVAL KADVELGGTD QKFNLLMGRE LQKAEGQKPQ AVIMMPLLEG LDGVKKMSKS
AHNYIGVSEP ANEMFGKIMS ISDELMWRYF ELLSFRPLAE IEQFKQDIAN GANPRDTKIA
LAKEIIARFH DQAAAESAHQ AFIDRFQKGA IPDDIPEVEL AAGEGLAIAN LLKDADLVGS
TSDAMRMIKQ SAVKMDGEKV DDSRMTLSAG TVAVFQVGKR KFAKVTLV
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