| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2839 |
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| Symbol | |
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| ID | 4253410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3393141 |
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| End bp | 3394514 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119474 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_734967 |
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| Protein GI | 113971174 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000124707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGA ATCTAACCGA CAGACTGTCA CGCACGCTGA AAAATATCAG TGGCCGTGGT
CGCTTAACCG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC GCTGCTGGAG
GCCGATGTTG CCCTGCCTGT GGTGCGTGAA TTCGTTAACA ATGTAAAAGA ACGTGCCGTT
GGTCAGGAAG TGGCGAAGAG CTTAAGTCCT GGTCAAGCCT TTATTAAGAT TGTTCAAAGT
GAACTTGAAA AATCCATGGG CGAGGCAAAC CAAGCTCTGG ATTTAGCCAC TCAGCCGCCA
GCCGTGGTGA TGATGGCGGG TCTTCAAGGT GCGGGTAAAA CGACCAGCGT TGCCAAACTG
GGTAAGCTGC TGCGTACGCG CCATAAAAAA TCGGTATTAG TTGTCAGTGC TGACGTTTAT
CGTCCTGCGG CGATTAAACA GCTTGAAACT TTAGCGACCG AAGTCGATGT GGAGTTCTTC
CCATCGGATG TGAGCCAAAA GCCAATCGAT ATCGCCAAGG CGGCCATTGC CCACGCCAAA
CTCAAATTTA TCGATGTGGT GATCCTCGAT ACCGCGGGTC GTCTGCACGT CGATGAAGCC
ATGATGGATG AGATCAAGGC GCTGCACGCG GCGGTTAAGC CGATTGAGAC ACTGTTCGTA
GTCGATGCCA TGACAGGTCA AGACGCGGCA AACACGGCCA AAGCCTTTAA CGAAGCGCTG
CCGCTCACCG GTGTTATTTT AACTAAGGTC GACGGTGATG CGCGCGGTGG TGCGGCATTA
TCGATTCGCC ACATTACAGG CAAGCCGATT AAATTCCTCG GTGTCGGCGA GAAGACCGAT
GCCCTAGAGC CTTTCCATCC AGACCGTATC GCCTCACGTA TTCTCGGCAT GGGCGACGTA
TTATCGCTTA TCGAAGAAGT TGAGCGCGGT GTCGATAAAG ATAAGGCGAT GAAGCTGGCT
TCCAAAGTGA AGCAGGGCGG CAGTTTTGAT CTTGAAGATT TCCGCGAGCA GCTACAGCAG
ATGAAAAACA TGGGCGGCAT GATGAGCATG ATTGAAAAGC TGCCCGGTGT GGGTCAGTTG
CCACCGGATG CCTTAGCGCA AATCCAAGAC GGTAAAATGA CCCGTCAAAT GGAAGCCATC
ATTAACTCAA TGACGGCGAA AGAGCGTAAA AACCCCGATT TAATCAAGGG CTCACGTAAG
CGTCGTATCG CTGCGGGTTC TGGTACGCAA ATTCAAGACG TGAACCGTTT ATTGAAACAG
TTTACCCAAA TGCAAAAGAT GATGAAAAAG ATGTCTGCCA AGGGCGGCAT CCAGAAGATG
ATGCGCGGAA TGCGTGGCAT GATGCCTGGC GGGATGAAAT TTCCTGGCCG TTAA
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| Protein sequence | MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV
GQEVAKSLSP GQAFIKIVQS ELEKSMGEAN QALDLATQPP AVVMMAGLQG AGKTTSVAKL
GKLLRTRHKK SVLVVSADVY RPAAIKQLET LATEVDVEFF PSDVSQKPID IAKAAIAHAK
LKFIDVVILD TAGRLHVDEA MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEEVERG VDKDKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMSM IEKLPGVGQL
PPDALAQIQD GKMTRQMEAI INSMTAKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSAKGGIQKM MRGMRGMMPG GMKFPGR
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