| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2833 |
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| Symbol | tyrA |
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| ID | 4253404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3388014 |
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| End bp | 3389153 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119468 |
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| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
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| Protein accession | YP_734961 |
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| Protein GI | 113971168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00724041 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAAA AAACCACAAC TGAATTAGAA CACCTTCGAG GTCTCATCGA TGGTGTCGAC
CAACAATTGC TGCATTTACT ACGTAAACGC TTAGATTTAG TCGCTCAGGT GGGAACGGTA
AAACACGCCG CAGGCCTGCC AATTTATGCG CCGCAACGCG AAGCGGCTAT GCTGGCAAAA
CGCCGCGAAG AAGCCAAGAA CATGGGCATA GCGCCACAAC TGATTGAAGA TATTTTGCGC
CGCTTGATGC GTGAATCCTA TCTCAACGAG AAGGATGTCG GCTTTAAGCA AGTAAAAAAC
GATCTCGGTT CAGTCGTGAT TGTTGGTGGT AAGGGTCAGC TTGGTGGACT GTTCCAACAA
ATGCTGACGC TCTCGGGTTA TCAGGTTAAA GTGCTTGATA AAGACGACTG GCAGCAGGCG
GAAACCTTAT TTGCCGACGC CGGATTGGTA CTGGTGACTG TGCCTATCGC CATCACCTGC
GACATTATCC GTGAGAAACT GACCCAATTA CCGCAGGAAT GTATCTTAGC CGACTTAACC
TCAATCAAGA CTGAACCTAT GAATGCCATG TTGGCCGCTC ACAAGGGGCC TGTTGTCGGC
TTTCATCCCA TGTTTGGCCC AGATGTCGGC AGTTTGGCTA AGCAGGTGGT GGTGGTGTGC
CATGGCCGCG AAGCCGATAA ATACCAATGG TTGCTCGAGC AAATTGGAAT TTGGGGCGCA
CGGATTGTAG AAGCTGAGCC TGAACGTCAC GACAATGCGA TGCAATTGGT ACAGGCGATG
CGCCACTTCT CGACCTTTGT GTATGGCTTG AACCTTTGCA AAGAAGAAGC GGATATTGAA
ACCCTGCTGC AATTTAGCTC ACCTATCTAT CGCTTAGAAC TCGCCATGGT CGGGCGCTTG
TTTGCCCAAA GCCCGGAGCT TTATGCCGAT ATTATTTTTG CCCAGCAGGA TAGCCAGCAT
GCGATTGGCG ATTATTTGGA TAACTATCGC GAAGCATTAG AGCTATTAAA GCGGGGCGAT
AGGGACGCGT TTATCAGCCA GTTCCAAACG GTAGCAAAAT GGTTTGGTGA TTTTGCTCCT
CAGTTTCAGC GTGAAAGTCG CATGATGCTG CAATCGGTCA GTGATATGAA AACGAACTGA
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| Protein sequence | MNEKTTTELE HLRGLIDGVD QQLLHLLRKR LDLVAQVGTV KHAAGLPIYA PQREAAMLAK
RREEAKNMGI APQLIEDILR RLMRESYLNE KDVGFKQVKN DLGSVVIVGG KGQLGGLFQQ
MLTLSGYQVK VLDKDDWQQA ETLFADAGLV LVTVPIAITC DIIREKLTQL PQECILADLT
SIKTEPMNAM LAAHKGPVVG FHPMFGPDVG SLAKQVVVVC HGREADKYQW LLEQIGIWGA
RIVEAEPERH DNAMQLVQAM RHFSTFVYGL NLCKEEADIE TLLQFSSPIY RLELAMVGRL
FAQSPELYAD IIFAQQDSQH AIGDYLDNYR EALELLKRGD RDAFISQFQT VAKWFGDFAP
QFQRESRMML QSVSDMKTN
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