Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2804 |
Symbol | |
ID | 4253375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3354039 |
End bp | 3354509 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638119439 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_734932 |
Protein GI | 113971139 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.446452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATGT TACTTGCCGT TGTTGTGATT GCTGGGGTGA TTTTTTACTT CTTTACCTCG ATGAATAACC AAAAAGCGGC CCAAGAAAAT ATCCGTTTAG GTAATGAGTT TTTAGCGCAA AACAAAACCC AAGAAGGAGT GAAAACCACC GCCTCTGGAT TGCAATATCA AGTGTTAAAG CAAGGCACTG GCACTGTTCA TCCTAAGGCG AGTGATACAG TGACTGTGCA TTACCACGGC ACCTTAATTG ATGGCACAGT GTTCGATAGC TCGGTAGAGC GCGGCGAACC CATTGCCTTC CCATTAAATC GTGTTATTCC AGGTTGGACT GAAGGCGTGC AACTGATGGT CGAGGGCGAC AAGTATCGCT TCTTTATTCC TAGCGAACTG GCCTATGGCA ACCGCAGTAC TGGTAAAATT GGCGGCGGTT CAGTACTGAT TTTTGATGTT GAGCTGCTGA AGGTAAATTA A
|
Protein sequence | MKMLLAVVVI AGVIFYFFTS MNNQKAAQEN IRLGNEFLAQ NKTQEGVKTT ASGLQYQVLK QGTGTVHPKA SDTVTVHYHG TLIDGTVFDS SVERGEPIAF PLNRVIPGWT EGVQLMVEGD KYRFFIPSEL AYGNRSTGKI GGGSVLIFDV ELLKVN
|
| |