Gene Shewmr4_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2804 
Symbol 
ID4253375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3354039 
End bp3354509 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content45% 
IMG OID638119439 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_734932 
Protein GI113971139 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.446452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TACTTGCCGT TGTTGTGATT GCTGGGGTGA TTTTTTACTT CTTTACCTCG 
ATGAATAACC AAAAAGCGGC CCAAGAAAAT ATCCGTTTAG GTAATGAGTT TTTAGCGCAA
AACAAAACCC AAGAAGGAGT GAAAACCACC GCCTCTGGAT TGCAATATCA AGTGTTAAAG
CAAGGCACTG GCACTGTTCA TCCTAAGGCG AGTGATACAG TGACTGTGCA TTACCACGGC
ACCTTAATTG ATGGCACAGT GTTCGATAGC TCGGTAGAGC GCGGCGAACC CATTGCCTTC
CCATTAAATC GTGTTATTCC AGGTTGGACT GAAGGCGTGC AACTGATGGT CGAGGGCGAC
AAGTATCGCT TCTTTATTCC TAGCGAACTG GCCTATGGCA ACCGCAGTAC TGGTAAAATT
GGCGGCGGTT CAGTACTGAT TTTTGATGTT GAGCTGCTGA AGGTAAATTA A
 
Protein sequence
MKMLLAVVVI AGVIFYFFTS MNNQKAAQEN IRLGNEFLAQ NKTQEGVKTT ASGLQYQVLK 
QGTGTVHPKA SDTVTVHYHG TLIDGTVFDS SVERGEPIAF PLNRVIPGWT EGVQLMVEGD
KYRFFIPSEL AYGNRSTGKI GGGSVLIFDV ELLKVN