| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2766 |
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| Symbol | |
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| ID | 4253337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3309344 |
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| End bp | 3310666 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119401 |
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| Product | isocitrate lyase |
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| Protein accession | YP_734894 |
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| Protein GI | 113971101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0008216 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGG CAACACAGAC TTCACGTCAG GCACAGATTG ACGCGATCAA AAAAGATTGG
GCTGAGAATC CACGTTGGAA AAACGTCCGT CGCCCATACA CTGCAGAGGA AGTTGTGGCA
CTTCGTGGTT CTATCGTACC CGAAAACACC ATTGCCAAAC GCGGTGCCGC TAAACTGTGG
GATTTAGTCA ACGGTGGCGC AAAAAAAGGT TATGTGAACT CGTTAGGTGC ACTGACTGGC
GGCCAAGCGG TACAACAGGC TAAAGCCGGT ATCGAAGCGA TTTACCTGTC TGGTTGGCAA
GTAGCGGCCG ACGCGAACTT AGCGGGCACT ATGTACCCAG ACCAATCTTT ATACCCAGCA
AACTCAGTGC CTGCTGTCGT AGCCCGTATT AACAACTCCT TCCGCCGTGC TGACCAAATT
CAGTGGAGCA ATGGGGTTAA TCCGGAAGAA GAAAACTTTG TCGATTACTT TCTGCCGATT
ATTGCCGATG CGGAAGCGGG TTTTGGTGGC GTACTGAATG CGTTCGAGTT GATGAAGTCG
ATGATCGATG CAGGCGCCGC CGGTGTGCAC TTTGAAGACC AATTAGCCTC TGTGAAAAAG
TGTGGCCATA TGGGCGGTAA AGTATTAGTG CCGACCCAAG AAGCGGTACA AAAGTTAGTT
GCGGCTCGCC TTGCAGCCGA CGTGAGCGGT GTTGAAACCT TAGTTATCGC TCGTACCGAT
GCGAACGCGG CGGATTTATT GACCTCTGAT TGCGACCCAT ACGATCGTGA CTTCGTGACT
GGCGAGCGCA CCAGTGAAGG TTTCTACCGC GTAAAAGCGG GTCTGGACCA AGCAATTTCT
CGCGGTCTAG CCTACGCACC GTATGCGGAT TTAATTTGGT GTGAAACCGC TAAGCCTGAC
TTAGAAGAAG CACGCCGCTT TGCTGAGGCA ATTCATGCTC AGTACCCAGA CCAATTACTG
GCCTATAACT GTTCACCTTC GTTCAACTGG AAGAAAAACT TGGACGATGC GACGATTGCG
CGCTTCCAAC AAGAGCTGTC GGACATGGGC TACAAGTACC AGTTCATCAC TTTAGCGGGT
ATTCATAACA TGTGGTACAA CATGTTTGAC CTGGCTTACG ACTACGCTCG TGGTGAAGGT
ATGAAGCATT ATGTTGAGAA AGTTCAAGAA GTTGAGTTTG CAGCAGCGAA GAAAGGCTAC
ACCTTCGTCG CGCATCAACA GGAAGTGGGC ACAGGTTACT TCGACCAAGT TACCACAGTG
ATCCAAGGCG GTCAGTCTTC TGTGACTGCA CTGACAGGCT CGACCGAAGA AGAGCAGTTT
TAA
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| Protein sequence | MTKATQTSRQ AQIDAIKKDW AENPRWKNVR RPYTAEEVVA LRGSIVPENT IAKRGAAKLW
DLVNGGAKKG YVNSLGALTG GQAVQQAKAG IEAIYLSGWQ VAADANLAGT MYPDQSLYPA
NSVPAVVARI NNSFRRADQI QWSNGVNPEE ENFVDYFLPI IADAEAGFGG VLNAFELMKS
MIDAGAAGVH FEDQLASVKK CGHMGGKVLV PTQEAVQKLV AARLAADVSG VETLVIARTD
ANAADLLTSD CDPYDRDFVT GERTSEGFYR VKAGLDQAIS RGLAYAPYAD LIWCETAKPD
LEEARRFAEA IHAQYPDQLL AYNCSPSFNW KKNLDDATIA RFQQELSDMG YKYQFITLAG
IHNMWYNMFD LAYDYARGEG MKHYVEKVQE VEFAAAKKGY TFVAHQQEVG TGYFDQVTTV
IQGGQSSVTA LTGSTEEEQF
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