Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2755 |
Symbol | glgC |
ID | 4253326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3292998 |
End bp | 3294260 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119390 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_734883 |
Protein GI | 113971090 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATG TACGTTATAT CAGTAATTTA ACTCGTGAAA CCTATGCATT GATTCTGGCT GGTGGCCGAG GCTCGCGTTT ACATGAACTC ACTGACTGGC GCGCTAAACC CGCGCTGTAT TTCGGTGGCA AGTTTAGGAT CATCGATTTT CCGCTGTCGA ATTGCATTAA CTCGGGGATC CGCCGTGTTG GGGTGGTGAC CCAATATAAG TCGCACTCGT TAATTCGCCA CGTGATGCGT GGTTGGGGCC ACTTTAAAAA GGAATTAGGT GAGTCGGTGG AAATTCTACC CGCCTCACAA CGTTACTCTG AGAATTGGTA TCAGGGCACG GCCGACGCGG TATTCCAAAA TATCGACATC ATCCGCCATG AGCTGCCTAA GTACGTGATG GTACTCTCGG GTGACCATGT TTATCGCATG GATTACGCTG GCTTACTCGC CGCCCATGCC GAATCCGGCG CCGATATGAC AGTCTCCTGC CTCGAGGTGC CCGTGGCCGA AGCGGCGGGC GCATTTGGGG TGATGGAAGT CGATGACGAG ATGCGCATCC TAGGATTTGA AGAAAAACCT AAGCATCCTA AACACTCCCC TGGCAACCCT GAGAAGTGCC TCGCCTCGAT GGGCAACTAT GTGTTTAACA CTGAATTTTT GTTCGATCAG TTGAAGAAAG ACGCGCAAAA CGCCAATTCC GATCGCGATT TTGGCAAAGA TATTATTCCC TCGATCATCG AAAAACATAA AGTGTTTGCC TATCCCTTTA AGAGCGCCTT CCCCAACGAG CAAGCCTACT GGCGCGATGT GGGCACCTTG GATTCCTTCT GGCAGGCCAA TATGGAATTG CTATCGCCCA CGCCCGCCTT AAACCTCTAC GATGCCAAGT GGCCGATTTG GACCTATCAG GAGCAATTAC CTCCCGCTAA GTTTGTGTTC GACGATGACG ATAGACGCGG CATGGCGGTG GATTCGATTA TATCCGGCGG CTGTATTATC TCGGGGGCGA CCGTGCGCCG CAGTGTATTG TTTAACGAGG TGCGGGTTTG TTCCTACTCA GTGGTTGAGG ATTCGGTTGT GCTGCCCGAT GTGGTGGTGC TACGCCACTG TAAGATTAAA AACGCCATCA TCGACAGGGG CTGCATCATC CCCGAAGGCA CAGTGATTGG TTATAACCAC GACCATGACA GGGCAAAGGG CTTTAGGGTG TCCGAGAAGG GCATCACCTT AGTCACCCGC GATATGTTAG GGCTGCCCGT GGGCTATGAG TAA
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Protein sequence | MSNVRYISNL TRETYALILA GGRGSRLHEL TDWRAKPALY FGGKFRIIDF PLSNCINSGI RRVGVVTQYK SHSLIRHVMR GWGHFKKELG ESVEILPASQ RYSENWYQGT ADAVFQNIDI IRHELPKYVM VLSGDHVYRM DYAGLLAAHA ESGADMTVSC LEVPVAEAAG AFGVMEVDDE MRILGFEEKP KHPKHSPGNP EKCLASMGNY VFNTEFLFDQ LKKDAQNANS DRDFGKDIIP SIIEKHKVFA YPFKSAFPNE QAYWRDVGTL DSFWQANMEL LSPTPALNLY DAKWPIWTYQ EQLPPAKFVF DDDDRRGMAV DSIISGGCII SGATVRRSVL FNEVRVCSYS VVEDSVVLPD VVVLRHCKIK NAIIDRGCII PEGTVIGYNH DHDRAKGFRV SEKGITLVTR DMLGLPVGYE
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