| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2747 |
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| Symbol | |
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| ID | 4253318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3280220 |
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| End bp | 3281572 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119382 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_734875 |
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| Protein GI | 113971082 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTA TTTCCGCTGC CGCAACGGAC CAACGCCTGC TGCAAGAGCC GATTTCAAAG
CTTTTTTGGC GCTACACTAT TCCAACGATC GCCTCCATGC TGGTGACTGG GGTGTATGTC
ACCATTGATG GTATCTTCGT TGGCCATTAC CTCGGCGAAA CTGGATTGGC GGGCATGATG
TTGGCCTATC CCGTGGGCGC GATTCTCTAT GCTGTCGGCG CCATGATAGG CATGGGCAGC
GCGGCGTTAG TCTCGATTAA CTTAGGGCAA GGTAATGTCA CCAAGGCGCG TAAGTTGCTC
GGCAATGCCT TTAGCTTGTG TTTACTGGCG GGGGCATTTT TTGCCTTAGT CGGCGGGATC
TTTTCTCGGG ATATTTTAAT TGCCCTCGGC GCCGAGGGGG AGATACTCGA AAACGCTAAC
GAATACCTGT TCTGGTATTT TGCCTTATGT CATTTCCCTA TTATTTCAAT GGCATTTACC
ACCTTGCTGC GTAACGATGG TCGCCCATCT ATGGTGACCT TTGTGCTGAT CTTAGGTGGC
GTGCTGAACA CCTTTTTAGA TTGGCTGTTT ATTGTGGTGT TTCCCTTCGG CTTGGCCGGG
GCGGCGATTG CCACCATGTT GTCGCAGGCC GTGACTGGGC TGCTCTGTTT GCAGCATTTC
TTTGGGGCGC GCACTCAGCT CAAAATCAAT CTTGAGCAGA TGAAGCTAAA GCTCGACAAC
TGCCTCAATA TTGCCCGTGT TGGCCTGCCA AGCTTTTTGA TGAACCTGTA TTTGTCGATC
GTATTGACCC TGCATAACAC CGCATTTTTA TGGGTCGGTG GCCCTCTGCA TGTGGCGGCA
TACGGGGTTG TGAGTTACAC CGAAGCGTTT TTCTATCTGA TTTTTGAAGG CATTGCCCTC
GGTACTCAAC CGATTTACAG CTTTAATGCT GGGGCAGGGC GCTTCGACAG GGTTAAACAG
GCACGCAATA TCGCCTTTGG CATGACACTA CTCACCGCTG CACTTGGCTT AGTGTTGATT
TATTCCCGCC CCGAATGGTT GGTGTACCTG TTTGCCGGTG ACAACCCAAG CTTAACGCCG
GTCGCGATTG AAGGAATGCG TTGGTATTTC TGGGGCTTAC CTATGGAAGG CTTGATTCTT
GTGGGCGCCA GTTTCTTCCA GGCGATTAAC TGTGCTAAGC AGGCATCGAT ACTCACTGGG
GCGAAATTGC TGCTTATCGC CGCCATTATC TATTGTTTTG CCTGGGCCTT TGGCGTGATT
GGCGTGTGGG TGTCGCTCGC GACCTGTAGC ACTATGCTGG TGATTTGGAT GTTTATCGCG
ATGGGGCGGC TCCAAGTGAA CGCTAAAGTC TGA
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| Protein sequence | MTAISAAATD QRLLQEPISK LFWRYTIPTI ASMLVTGVYV TIDGIFVGHY LGETGLAGMM
LAYPVGAILY AVGAMIGMGS AALVSINLGQ GNVTKARKLL GNAFSLCLLA GAFFALVGGI
FSRDILIALG AEGEILENAN EYLFWYFALC HFPIISMAFT TLLRNDGRPS MVTFVLILGG
VLNTFLDWLF IVVFPFGLAG AAIATMLSQA VTGLLCLQHF FGARTQLKIN LEQMKLKLDN
CLNIARVGLP SFLMNLYLSI VLTLHNTAFL WVGGPLHVAA YGVVSYTEAF FYLIFEGIAL
GTQPIYSFNA GAGRFDRVKQ ARNIAFGMTL LTAALGLVLI YSRPEWLVYL FAGDNPSLTP
VAIEGMRWYF WGLPMEGLIL VGASFFQAIN CAKQASILTG AKLLLIAAII YCFAWAFGVI
GVWVSLATCS TMLVIWMFIA MGRLQVNAKV
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