| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2710 |
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| Symbol | |
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| ID | 4253281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3232121 |
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| End bp | 3233065 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119345 |
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| Product | porin |
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| Protein accession | YP_734838 |
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| Protein GI | 113971045 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000036835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000168324 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAACG TTTTTTGTAA AACTCTACTT GCTTCTGCGC TAGCTTCTGC AACTCTGGCT
TCTGCTTATG CCGCTGAGCC ACTGACTGTT TATGGTAAGT TGAACGTTAC CGCTCAATCA
AATGATGAGA AAGGTGATTC TACAACAACT ATTCAAAGTA ATGCTTCTCG TTTTGGTGTG
AAGGGTGATT TCGAACTGTC TAGCTCGCTG GAAGCGTTCT ACACAGTAGA GTACGAAGTT
GATACTGGCG CTGCAACAAG CGACAACTTC AAAGCCCGTA ACCAATTCGT TGGTTTAAAA
GGTGCATTTG GTTCTTTCTC TGTTGGTCGT AACGACACTC TGTTAAAGAT CTCTCAAGGT
AACGTTGACC AGTTCAACGA TTTATCAGGT GACTTAAAGA GCCTGTTCAA AGGTGAAAAC
CGTTTAGGTC AAACTGCAAC TTACCTGTCA CCTTCAATCG GTGGTTTCGT ATTCGGTGCA
ACTTATGCTG CTGAAGGCGA TGCTGACCAA CAAGCTCAAG ACGGTTTCAG CTTAGCCGCT
ATGTACGGTG ACGCTAAACT GAAAAAATCA CCTTTCTACG CCGCTATCGC TTACGATTCT
GACGTAAAAG GTTATGAAAT CCTGCGTGCA TCGGTACAAG GTAAAATCGC TGATTTAACC
TTAGGTGGTA TGTATCAACA ACAGGAACAA ACCTACAAAA ACGCTTTACC TGTTAACACT
GACAGCGTGA ACGGTTACCT GTTTAGCGCC GCTTATGATA TCAATGCTGT GACGTTAAAA
GCCCAATACC AAGACATGGA AGACTTAGGT GATTCATGGT CAGTGGGTGC GGACTACAGC
TTAGGTAAGC CTACGAAAGT GTTTGCTTTC TATACTAACC GTTCTATGGA AGCGTCTAAC
GACGATGACA AATACATAGC TGTAGGCTTA GAACACAAGT TCTAA
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| Protein sequence | MMNVFCKTLL ASALASATLA SAYAAEPLTV YGKLNVTAQS NDEKGDSTTT IQSNASRFGV
KGDFELSSSL EAFYTVEYEV DTGAATSDNF KARNQFVGLK GAFGSFSVGR NDTLLKISQG
NVDQFNDLSG DLKSLFKGEN RLGQTATYLS PSIGGFVFGA TYAAEGDADQ QAQDGFSLAA
MYGDAKLKKS PFYAAIAYDS DVKGYEILRA SVQGKIADLT LGGMYQQQEQ TYKNALPVNT
DSVNGYLFSA AYDINAVTLK AQYQDMEDLG DSWSVGADYS LGKPTKVFAF YTNRSMEASN
DDDKYIAVGL EHKF
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