Gene Shewmr4_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2649 
Symbol 
ID4253220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3156430 
End bp3156894 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID638119284 
Productflavodoxin 
Protein accessionYP_734777 
Protein GI113970984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTAATCTGGT TTTTGGCACT GTGTATGGTA GCGCACAATT TACCGCCGAA 
ACCTTAGAAA AAGCGCTAAC AGAACTCGGT TATGACGCCA AATTGTGGCA ACCGAACGAA
ATTAGTCAAT TTACGCCGCC ACAGGATGAG TTGTTAGTGG TCGTGACTTC GACCACTGGG
CAAGGGGATT TACCCGACGA TATTCAGCCT TGGTACTATC ATCTTAAGGA GACAGCGCCT
TATCTGCCTG AGCTGAAATA CAGTGTGATA GCACTCGGCG ATTCGAGTTA CGATACCTTT
TGTGGTGCGG GTAAATCGGT AGATGAATTG CTCAGCGAGC TAGGCGCCAA ACCCGTTGTG
GCGCGTCTTG AAATTGATGC CTGTGAAACC ATGGAACCCG AGGTCGAAGC GATAAAATGG
CTGGAAAGCT GGAATCAAAT CGTCAAATCC GAACGCGCCG CTTAG
 
Protein sequence
MKKVNLVFGT VYGSAQFTAE TLEKALTELG YDAKLWQPNE ISQFTPPQDE LLVVVTSTTG 
QGDLPDDIQP WYYHLKETAP YLPELKYSVI ALGDSSYDTF CGAGKSVDEL LSELGAKPVV
ARLEIDACET MEPEVEAIKW LESWNQIVKS ERAA