Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2631 |
Symbol | lpxD |
ID | 4253202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3134903 |
End bp | 3135928 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119266 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_734759 |
Protein GI | 113970966 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000719078 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.149676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTG TGACTTTAAA AGAGCTAAGC CTGTTATTAG ACGGCGTTGT CCAAGGCGAT GAAACGTTAG TGATCAACAG CGTTGCGACA CTTGAACATG CCACAGCGGG ACAAATCTCT TTTTTAGCCA ACAGCAAATA CCGTGCTCAG CTTGAGTTAA CTCAAGCGAG TGCGGTGTTA TTGTCGGCTA AAGATGCGCA GGACTATTCT GGCACTGCGT TAGTAGTAAA AGATCCCTAT GTAGGGTTTG CCCGTGTGGC ACAGTTGTTA GATACCACGC CTAAGGCGGC CATAGGTATC CATCCTTCGG CACAAATCGA TCCTTCCGCC CTGTTAGGTG AAGGGGTGGC TATCGGTGCT AATGCGGTGA TCGGCGCCAA TGTGATCCTC GGTGAAAACG TCCAGATTGG TGCGGGCACT GTGATTGGTC AAGACTGCAT TATAGGTTCA AATACCCGCC TGTGGGCCAA TGTGACCCTG TATCACAACG TCCATTTAGG CCAAGATTGT ATTATCCATT CCGGCGCGAT TATTGGTTCC GACGGTTTTG GTTACGCTAA TGAGCGCGGA CAGTGGATTA AGATCCCGCA AACTGGTGGT GTGCGCATTG GTGACCGAGT CGAAATCGGT GCTAGCTCAA CTATCGATCG CGGCGCCTTG GGTCATACTG AGATCCACAA TGGTGTGATC ATCGACAACC AAGTGCAGGT TGCCCATAAC GATATCATTG GTGAAAATAC CGCGATTGCT GGCAGCACCA CACTTGCTGG CAGTGTTACT ATTGGTAAAC ATTGTATTAT TGGTGGTAAT TGCGCGATTG CTGGCCATTT AACTATTGCT GATGGTGTCC ATCTTTCTGG CGCGACAAAT GTTACTGGCA ATATGCGTGA GCCTGGTTTG TATTCTTCTG CGACAGTCGC AATGGAAAAC AAAGTATGGC GTAAAAATAC AGTTCGCTTC CGTCAATTGG ATGAACTGTT CCAACGCGTG AAGACGTTGG AAAAGAATTC AAATACACCA GAGTAA
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Protein sequence | MKSVTLKELS LLLDGVVQGD ETLVINSVAT LEHATAGQIS FLANSKYRAQ LELTQASAVL LSAKDAQDYS GTALVVKDPY VGFARVAQLL DTTPKAAIGI HPSAQIDPSA LLGEGVAIGA NAVIGANVIL GENVQIGAGT VIGQDCIIGS NTRLWANVTL YHNVHLGQDC IIHSGAIIGS DGFGYANERG QWIKIPQTGG VRIGDRVEIG ASSTIDRGAL GHTEIHNGVI IDNQVQVAHN DIIGENTAIA GSTTLAGSVT IGKHCIIGGN CAIAGHLTIA DGVHLSGATN VTGNMREPGL YSSATVAMEN KVWRKNTVRF RQLDELFQRV KTLEKNSNTP E
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