Gene Shewmr4_2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2619 
Symbol 
ID4253190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3116382 
End bp3117140 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID638119254 
Productputative hydrolase 
Protein accessionYP_734747 
Protein GI113970954 
COG category[R] General function prediction only
[E] Amino acid transport and metabolism 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000339322 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTACC CAGTCGATAC CCATACCCAT ACCGTGGCAT CAACCCATGC CTATAGCACT 
ATCCACGATT ATTTGGCGGT GGCGAAGCAA AAGGGGATCC GTCTGTTTGC TACTACCGAC
CATGGCCCGG CGATGGCGGA TGCACCGCAT TTTTGGCATT TTGTGAATTT ACGCGTGCTT
CCGCGTATGG TCGATGGCGT GGGGATTTTA CGCGGCATCG AAGCGAACAT TAAAAACCGC
GAAGGTGAAA TCGATTACTT TGGCGATTAT TTGTCGCAGC TCGATATTGT GTTGGCAGGG
TTCCATGAAC CGGTATTTCC GCCTTCGGAT AAGGCCACCC ATACCGAGGC GATGATCAAC
GCCATTAAAA GTGGCAAGGT CGATATTATT ACCCACCCGG GTAATCCTGC TTATCCCATT
GATATTGAAG CTGTAGCCGC AGCTGCTGCC GAATATGGGG TGGCGCTTGA AATCAATAAT
TCCTCCTTTG AAGTCTCTCG CAAGGGCAGC GAAGCTAACT GCACCGCGAT TGCCAAAGCA
GCAAAAGAAT TGGGGGCCAC CTTAGTGATG GGCTCAGATT CCCATGTGGC TTTTAGTCTT
GGCGGGTTTG ATCGTGCCTT AAGTATTATT GAAGCGGTTG ATTATCCAAA GGATAAGCTA
CTCAACCGCT CGCCGATGGC GCTGCTTAAC TTCTTAGCTC AGCGGGGGCA TAAAAGCGTT
GCCGATTTAA TGCCGCTGTT TAGCGACGAT ATCGCTTGA
 
Protein sequence
MQYPVDTHTH TVASTHAYST IHDYLAVAKQ KGIRLFATTD HGPAMADAPH FWHFVNLRVL 
PRMVDGVGIL RGIEANIKNR EGEIDYFGDY LSQLDIVLAG FHEPVFPPSD KATHTEAMIN
AIKSGKVDII THPGNPAYPI DIEAVAAAAA EYGVALEINN SSFEVSRKGS EANCTAIAKA
AKELGATLVM GSDSHVAFSL GGFDRALSII EAVDYPKDKL LNRSPMALLN FLAQRGHKSV
ADLMPLFSDD IA