| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2613 |
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| Symbol | |
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| ID | 4253184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3109205 |
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| End bp | 3111493 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119248 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_734741 |
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| Protein GI | 113970948 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000355284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000740819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAAA ACTACAATAA ATCTCTACTG GCACTAGCAC TCACTAGTGC CATGTTTTTA
ACCGCCTGCG GGGACGGAGA AGACGGGCAA GATGGTGCGC CCGGAACACC AGGTACCCCT
GGAACGCCCG GAACCCCTGG CACACCTGGT TTACCAGCGG GTTCTTTTGC TAAAACCGCA
GAATCTATAA CCGATCTGAA ATTCACCCTC AGCCCAGCTG ACATTAAAGT CACCAGCAGT
GAAGGCTTTA GTGTTAAGTT CAGTTTAACC GGAAAGAGTT CAGGCAAAGA TGTGCCCTTT
ATGGGACTCG ATAAAATTGC ACTTTACTCA TTAACGGCAA ATGAAAATAC TTCAGGTACA
GGTGCCCCTA TCCAATGGCA AAACAATGCT ATGGCAAACA ATGCGGGCAG CTCATTAACT
TGTACACTCA ATGGCTTAAA CGGTACTAAG AATGCGTGTA CATTAACTGA AGATACTGAA
AATCCAGGTA GTTACACCGC AACTTGGACC TATGATGGCG CAGCGCCAAT CATCAATCCA
AACGATAATC CAAATGCGGT ACACAGAGTC TTCGTCCGCG CTTACAACAT AGTCAACAGC
GAAGGCGTGG CTTTATCTGA TAAAGTGCTC TCAGTACCAG TTGATTTTAT CCCTGCAACC
GATGAGCTTG CCGCATCAGG CAAAGACACA GTATCCAGCG CTGCATGTAA AAACTGTCAC
GGTGAAGTGG ACGGCCATAT CGCTAAGATT GAAGCCCACC ATAACTACCA AGACGTTAAA
AACTGCGTAA CCTGTCACAA CCCAGAGCAA GTCCCAAGCG ATGCGCAGCT CGCTGAAGGC
TGGGTATTTG ATTTCGCGCC GATGATCCAC CGTATCCATG CTGGTGAACA CAATGCGGAC
TACCTGTCTG GTGAAGCGAA AGAGTACTTC GGTGAAATTG GTTTCCCATC AGACTTGAAA
GAATGTAAAT CCTGTCACGA TGGTGCACCT AGCTATAACA CCAATATCTA CGCTCAGGCT
TGCGTGGGTT GTCATATCAA TGTCAACTTC GCAACCGGTG AAAACCACTC AGAATTTGGT
TTGGCTCAAG CCGATGATAC TCAATGTAAA TCCTGCCATG GCAGCGGTAG CTTAACGCCA
GAAGCGGTTC ACAGTGTTGG TAAACGTGCT GAATACGGCC CATTAATGAC CGTCGACTTT
ACCAGTGCAA CGCTGGGCAC TTCAGCAACA CTAGGTATGC AAACTCTGAC ATTGAAAGCC
AATGTCACAC TCAATGGCGC GCCTATTGCT GATGGTACTA GCCTGAAAAC CTACAATGCC
ACCAGCAACC CAACAGGTAT GTTTGCGGCA AACGGTCTGC TACTGGGTAA TGTGGCGACA
GATGGTACAG TGTACTCATG GCGCGATGTT AAGCCTTTAG CCATCAGCAT GAAACTGGAT
AACGGTACTC TGTCAGGTGG TGTATTAACC TTCGTGAAAG ATATTCCAGA TGCACAAGCA
ACTGGCACTA TCTACGTCGG TTCTGAAGCC AACTTCTGTG CGAAAGCGGG TAAAGCGGTG
AGCTGTAATA CCGACGGACT TGAATATGGC CCAACTAGCC CTGTAGGTAA CATTTCTGCG
GTTAAATTCT TCAACTTAAG CGGTGGCACT CCAGCCGTAG CTCGTATGAA GGATCCAGCA
CGGATTACCG TTGAAGAAGC AAAATGTAAC GCTTGTCATG GCAGCTTAGA CTATGCGAAA
GGCTACAGAC ACGGGGTTTA CACCTTCGAT CAATGTATGC ACTGTCACAA CGATACCACT
GGCGCTTCAG GTCATGGTCA AACTGGCTAC AAAGGCGAAG ATGGCAAGTT AGTCGTCACT
CCTGAAGTGA CCTTCAACAA CAAAGATCTC TTCACCGTGG CTCACCGCTT CCACAGTGGT
AACTTCGGTG TTGTAGAAGG CATCTTCCGC AATGCAGCTG GCGAACTAGA AGGTTATCCA
TCACCCGAAA CCGCCTGTTC TGCCTGTCAC AAAGATGGTG CAACCCTGTT CGCAACTGAT
GGTGGCTTAA CTTCAGGCAA ACGTGCTATC AAAGTGGGCA GTAACTACAT TAGCCCAGTG
GCTGAATCCT GCCGCACCTG TCACGCTCAC TCAGATGCAG CAGCAGTGGC TCACTTTAGA
AGTAACGGCG CGATTGTAGA AGCGGATGCT GCAACCGATC CTAACCTACC AGTAGAATCA
TGCGCGACCT GCCATGCTGA AGGTAAAACC TATGGCATAG ATAAGGTACA CGCAGAGGTA
GCACACTAG
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| Protein sequence | MMKNYNKSLL ALALTSAMFL TACGDGEDGQ DGAPGTPGTP GTPGTPGTPG LPAGSFAKTA
ESITDLKFTL SPADIKVTSS EGFSVKFSLT GKSSGKDVPF MGLDKIALYS LTANENTSGT
GAPIQWQNNA MANNAGSSLT CTLNGLNGTK NACTLTEDTE NPGSYTATWT YDGAAPIINP
NDNPNAVHRV FVRAYNIVNS EGVALSDKVL SVPVDFIPAT DELAASGKDT VSSAACKNCH
GEVDGHIAKI EAHHNYQDVK NCVTCHNPEQ VPSDAQLAEG WVFDFAPMIH RIHAGEHNAD
YLSGEAKEYF GEIGFPSDLK ECKSCHDGAP SYNTNIYAQA CVGCHINVNF ATGENHSEFG
LAQADDTQCK SCHGSGSLTP EAVHSVGKRA EYGPLMTVDF TSATLGTSAT LGMQTLTLKA
NVTLNGAPIA DGTSLKTYNA TSNPTGMFAA NGLLLGNVAT DGTVYSWRDV KPLAISMKLD
NGTLSGGVLT FVKDIPDAQA TGTIYVGSEA NFCAKAGKAV SCNTDGLEYG PTSPVGNISA
VKFFNLSGGT PAVARMKDPA RITVEEAKCN ACHGSLDYAK GYRHGVYTFD QCMHCHNDTT
GASGHGQTGY KGEDGKLVVT PEVTFNNKDL FTVAHRFHSG NFGVVEGIFR NAAGELEGYP
SPETACSACH KDGATLFATD GGLTSGKRAI KVGSNYISPV AESCRTCHAH SDAAAVAHFR
SNGAIVEADA ATDPNLPVES CATCHAEGKT YGIDKVHAEV AH
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