| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2605 |
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| Symbol | |
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| ID | 4253176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3101085 |
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| End bp | 3102623 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119240 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_734733 |
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| Protein GI | 113970940 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0016183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000106827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTTAGCTG TCAAGATCGC GTGGGTTTAG CGAAAGACAT CTTAGTCGTG
TTAGAACGTT ATGGCATTAA TCTCATCGCC ATCGATGCCA GTAACCAGGG CTTTCTCTAC
CTGCAATTTG CCGAAATTAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA
GTGGAGAGTG TTCACGATGT GCGAACTGTG TCGTTTATGC CTTCGGAGCA GGAACACTAC
GCCTTAAAAA CCCTACTTAA AACCCTCCCT GACTCAGTGT TCTCCATCGA CGTGAAGGCG
CGCATTCGTA TCGTCAACGA GTCGGCGCTA CTCAATATGG GCATGGGGGA GCACGAAGTG
CTCGATGAGT CCTTAAACCA TTGGGTGCAA GGGTTCAACT TCAGCCGCTG GCTCAGTGAG
AGCCAAGTGT TGCCGCAGGC GGCGCGGGTC AATATCGGCC AAAACGAATA TCTGGCCGAA
ATGTTACCGA TTTACTTACC CGATGAGGAT GATAAGACCA TCCTCGTGGG CGCAGTAGTA
TCGCTTAAAT CGCCGGCGCG GGTCGGTAAA CAATTCAATG CATTGCAAAA TCAAACCGCG
GGCTTTGAAA ATGTATTAGC CAGCAGTGAC AAGATGAAAG AAGTGCTGAA ACAAGCTCGC
CGTATGGCGC AGCTCGACGC GCCGCTATTA ATCACTGGCG AGACTGGCAC GGGCAAAGAG
CTAATGGCTC GAGCCAGCCA TGATGCCAGC ATGCGCCGCG AAAAACCTTT TATCGCTATT
AACTGTGCGG CACTGCCCGA TAGCGCCGCC GAAGAGGAAC TCTTTGGCTA CGTCAGCCAG
GGCAAAGTGA TTAAGCGCGG CTTTTTTGAA GAAGCGAAGG GCGGCACTGT GTTCCTCGAT
GAAGTGGCCG AAATGTCTAA GGCGGCGCAG GTTAAATTGC TGCGGTTATT ACAGGATGGC
ACCTTTAGAC GCATTGGAGG CGACGAAGAA GTTCGCGCCG ATGTGCGGAT CATCTGCTCG
ACCCAGAAAA ACTTAGCCGA GCTGTGTCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT
CGCATCCATG TGCTTAGCTA TCATATTCCA TCACTGCGCG AGCGCAAAGT CGATATCATT
CCGCTGACGG AGATGTTCCT CGAGCACTAC AGTCAGCAAC TCTCGAGTCC AGTGAGACGA
ATTTCGGCCC AATGCCGCGA CCATCTCTTA ACCTATGCCT GGCCGGGTAA CGTGCGTCAG
CTTAAGAATG CGGTCTTTAG GGCGGTATCT ATGTGGGATG GCTCGGGCGA GTTGACCGTT
GAGCAACTTA AGTTGCCATC GTACGCCGAA GGTTTTGGCT ATTTCGATAA TGCCTTCGAA
GGCAATCTCG ATGATGCGAT GAAACAGTTT GAGGCCAGCT TGCTGCGCCG CTTATATCCG
GCTTACCCCA GTACTCGCCA ATTGGCGAAA AAATTAGGGG TGTCCCACAC GGCCATCGCC
AACAAACTCA GGGAATACAA GATAGCCAAG CCAAAGTAA
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| Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNMGMGEHEV
LDESLNHWVQ GFNFSRWLSE SQVLPQAARV NIGQNEYLAE MLPIYLPDED DKTILVGAVV
SLKSPARVGK QFNALQNQTA GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVIKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSGELTV EQLKLPSYAE GFGYFDNAFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK PK
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