| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2601 |
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| Symbol | |
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| ID | 4253172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3097049 |
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| End bp | 3097696 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119236 |
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| Product | outer membrane protein W |
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| Protein accession | YP_734729 |
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| Protein GI | 113970936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000011484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000556975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGAATA AAACTACTGT TTCTACACTG ATCGCTGCCA CCTTGTTAGC CGCTGGTTTC
TCTGCTTCTG TTTCTGCCCA TCAAGCGGGC GATATTATTG TTCGTGCTGG TGCTGTGGTT
GTCGCGCCAA GTGAATCTAG TGATCCTGTT GCTACGTTTG GTGAGTTTCA AATCAGCAAT
AACACTCAAC TGGGCTTGAA CTTTGGCTAC ATGTTGACCG ATAACTTCGG TGTAGAGTTA
TTAGCTGCAA CACCTTTTAG CCACGATGTT TCTTTAAAAG GTGTGGGTAA AATTGCAGAA
ACTAAGCACT TACCACCAAC CTTAGTTGCA CAGTATTATT TCGGTGATGC TCAATCCAAA
TTACGTCCAT ATGTGGGTGT TGGTGTGAAC TACACTAACT TCTTCGACAA TGAATTCACC
AACGACTTAG ATGGTGCATT AACTGACTTA AGCATGAGCA CCTCTTGGGG TTTAGCGGCG
CAAGTGGGTT TAGATTACCA AGTGAACAAA AACTGGTTAG TGAACGCCTC TGTGTGGTAT
GCGCAAATTA GCAGCGATGT GAAGTTTAAA TTAGCGGGTG ATACAGTGGT TATCGATACC
GATATTAACC CATGGGTTTA TATGGTCAGC GTTGGCTACA CTTTCTAA
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| Protein sequence | MMNKTTVSTL IAATLLAAGF SASVSAHQAG DIIVRAGAVV VAPSESSDPV ATFGEFQISN
NTQLGLNFGY MLTDNFGVEL LAATPFSHDV SLKGVGKIAE TKHLPPTLVA QYYFGDAQSK
LRPYVGVGVN YTNFFDNEFT NDLDGALTDL SMSTSWGLAA QVGLDYQVNK NWLVNASVWY
AQISSDVKFK LAGDTVVIDT DINPWVYMVS VGYTF
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