Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2598 |
Symbol | |
ID | 4253169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3094659 |
End bp | 3095600 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119233 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_734726 |
Protein GI | 113970933 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00675576 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000129585 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGTTA AAATTCCAGA TCATCTGCCT GCTGCAGGGA TTTTAGAATC TGAAAATATT TTCGTAATGT CCGAGACCCG GGCTGCCAAT CAGGATATCA GACCGATGAA GGTGCTGATC CTGAATCTGA TGCCCAATAA AATCGAGACA GAAACCCAGC TTCTACGCCT ATTAGGTAAC ACGCCTTTGC AGGTGGATGT GGATTTACTG CGTATTCACG ATAAAGAGTC AAAGCACACC TCAATCGATC ATATGAACAC CTTCTACCGT GATTTTGAGG ACGTGCGTCA TAAAAACTAC GACGGCCTGA TCATCACGGG CGCGCCCCTT GGGCAAATCG ATTTCGAAGA GGTCACTTAC TGGGATCATA TCCGCGAGAT TATCGATTGG TCACAGCAAC ATGTGACGTC GGTATTATTC CTCTGCTGGG CTGCTCATGC CGGGCTTTAC CATCTCTACG GTTTGAATCG GAAAATCCTG CAGCAAAAGC GTTCAGGGGT GTTTGTGCAT CGCCGTACTT GCCAACATTT CCCGCTGCTG CGCGGATTCG ATGATGAGTT CTTTGCGCCG CATTCCCGCT TTGCTGAGAT GGATATCGAG GAACTTAAAC AACACCCTGA GCTACAAGTG CTGGCAGAAT CCGATGAGGC AGGGGCCTAC TTAGTCCTCA GTCGCAATAA TCGCAACCTG TTTGTGATGG GTCACCCCGA ATACCAAAAA TCTACCTTAA ACGATGAATA TCATCGGGAT TTGGCGCAGG GATTAAACCC AAATGTGCCG CAAAACTATT ATCGTAATGA CGACCCCCAG GCCGATGCTA TTGCCCGTTG GCACAGCCAT GGCAGTTTGT TAGTCAGCAA CTGGCTCAAC TATTATGTGT ACCAATTAAC GCCTTACGAT CTGAGTGATA TGACAGCGAT GACGCCGTGG GAGTCGCAAT AG
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Protein sequence | MPVKIPDHLP AAGILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN TPLQVDVDLL RIHDKESKHT SIDHMNTFYR DFEDVRHKNY DGLIITGAPL GQIDFEEVTY WDHIREIIDW SQQHVTSVLF LCWAAHAGLY HLYGLNRKIL QQKRSGVFVH RRTCQHFPLL RGFDDEFFAP HSRFAEMDIE ELKQHPELQV LAESDEAGAY LVLSRNNRNL FVMGHPEYQK STLNDEYHRD LAQGLNPNVP QNYYRNDDPQ ADAIARWHSH GSLLVSNWLN YYVYQLTPYD LSDMTAMTPW ESQ
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