Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2574 |
Symbol | |
ID | 4253145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3062894 |
End bp | 3063934 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638119209 |
Product | ABC transporter related |
Protein accession | YP_734702 |
Protein GI | 113970909 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTC AACAGGCTTC AGCAGGGATA TCCGTCGCTG GGACATCAGC GGCAGAAACA TCAAACGCGG CTACTGAGTT TGCTATCGAA ACCCGCGGCA TGACCCGCGC CTTCGGTGGC ATCAATGCGG TCGAAGATCT CGATTTAGCT ATCCCTAAGG GCACGATTTA TGGATTTTTA GGCCCCAATG GTTGCGGTAA ATCGACCTCT ATTCGGATGT TAACTGGACT GCTGAGTCCA ACCTCGGGGG ATATTCGGGT GCTGGGCGAA ACCTTGCCCG GCGCCGAGGA AAAACTGCGC CGCCGCATTG GCTATATGAC GCAAAAATTC TCCCTCTACG ACAATTTGTC GGTGCGGGAA AACCTTGAGT TTGTGGCACA AATTTATGGG CTGAATCGTC GCCAAACCAA GGCGCGTTTG GCCGAGCTAT TAAGCCTTTA CGATTTGGCG GGGCGCGAGA AGCAAATGGC GGGCTCCATG AGTGGCGGGC AAAAGCAGCG TTTAGCCTTA GCCGCCGCGA CCTTACATCA CCCCGAGCTG TTATTTCTCG ATGAGCCGAC GTCGGCGGTA GACCCTGAAA ATCGCCGCGA GTTTTGGGAA CGGCTGTTCG ACCTCTGTGC CCAAGGCACC ACGATTTTAG TCTCGACCCA CTATATGGAT GAGGCCGAGC GTTGCCATGG TCTCGCGATT TTAGAGCGCG GGATAAAACG CGCCGACGGC TCGCCGCAAC AACTCATGGC GGCCATGGGT GCGCGGGTCA TTGAAGTGTC GGGGGAGGAT TTACGTAAGC TTAAACAGTC GCTTATCAGC GACGCCAATG TGTTATCGGC GGCGCAGATT GGCAGTCGTT TACGGGTATT GGTGCAAAGT TCGATTGCAG ATCCGCTGGC TTGGTTAAGC CCAAGGGTTG CGGGGCGGGC GCTGACCGAG GTGCGTCCAA GCCTTGAGGA TGTGTTTGTC ACTTGCACGG GCGGACGTGC CCAGCTAACA CCGCCAAACG GCAGTCAGGC CACGACAGTG GAGGCTCAAG ATGCTACGTA G
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Protein sequence | MSAQQASAGI SVAGTSAAET SNAATEFAIE TRGMTRAFGG INAVEDLDLA IPKGTIYGFL GPNGCGKSTS IRMLTGLLSP TSGDIRVLGE TLPGAEEKLR RRIGYMTQKF SLYDNLSVRE NLEFVAQIYG LNRRQTKARL AELLSLYDLA GREKQMAGSM SGGQKQRLAL AAATLHHPEL LFLDEPTSAV DPENRREFWE RLFDLCAQGT TILVSTHYMD EAERCHGLAI LERGIKRADG SPQQLMAAMG ARVIEVSGED LRKLKQSLIS DANVLSAAQI GSRLRVLVQS SIADPLAWLS PRVAGRALTE VRPSLEDVFV TCTGGRAQLT PPNGSQATTV EAQDAT
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