| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2556 |
|---|
| Symbol | |
|---|
| ID | 4253127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3042633 |
|---|
| End bp | 3043715 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638119191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734684 |
|---|
| Protein GI | 113970891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.209543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT TGTTGTATTC TTTAAAGCAG GGGTTCGAAG CCCTGAAAAG TATTCGCAAT
CATATAGTGG AAGCGAATTT ACCCGCAGAT TTCCCTCGAC CCGAATTACC GCCGATATCA
GAAGAGGCGA AAGCGGCACT GTTGCAACTA CTCGAGCCGC TAGAAGCTTA TCGAATTGAA
AAACTTGAAA CGAAACTTTC TCGGAAGAAA TGGGCCAAGC GGTTAGGCTG GCTCCTGTGC
TTGCCTGCGC TGGTTGTTGA TTTGATGTCG TTAGCCTCAA ATAGTGACCC AAGCATTCTG
AGCTTGATTG TTCTCGCAGG CATCTTGATG TGGGTTCAGT TGCCTGAAAT ACAATTTAAG
CGCCATTATA AGAATAAAAT TTTACCTGTT TTACTCGATA AATTAGGGGA TTACCAATAT
AGCCCCGATT CCTGTGTCAA TCTGGATGCC GTGGCTGATT TTGAACTTAT GCCCAGTTTT
AGCAAGAAAG AAGCTGAAGA CCATATTCGC GGCAAGGTAG AAGATGTTAG CTTCGAGTTT
TGCGAGTTAA CCTTAAAATC CCGTGGAAGC AAGTCGGATA AAATTCAATT TAAGGGTGGG
GTGGTGATTA TCACTATGCC CTTTCATTTT GAATCTCACA CCATTGTTAG CCAAGACTAT
GGTTCCCTGG GGAATGCCAT TTCAGGCATC AAGCAACCCA GAGTTAAACT AGAAAGTGTC
ACCTTTGAGG CCATGTTTGA AGTGTATTCA CACGATCAAC ATTATGCGCG TTATTTATTG
TCACCCGCAG TGATGGAACG ATTGGTTGAG TTGGAGCAAT TATTCCGGAA AACCGCACGA
GGTTCAGGGA TAAGCATCGA GTTTAAAAAT AATACAGTGC TTATTATGGC GAGCTATTTT
GGTAATTTAT TTGATAATGT GGACATCAAC TTGCCCACAC AGGATATGTC AAAGATCCCA
TTGTTACAGC AGGAGCTGGT CCTCATCACT AGCATTATCA AGCAGCTAAA ACTGGATTAT
CTCGCGGCAC AAAATGTGGC AGCACAAAAA ATGCATGCGA GGATGGAGAC ATTAGCGAGT
TAA
|
|---|
| Protein sequence | MSQLLYSLKQ GFEALKSIRN HIVEANLPAD FPRPELPPIS EEAKAALLQL LEPLEAYRIE
KLETKLSRKK WAKRLGWLLC LPALVVDLMS LASNSDPSIL SLIVLAGILM WVQLPEIQFK
RHYKNKILPV LLDKLGDYQY SPDSCVNLDA VADFELMPSF SKKEAEDHIR GKVEDVSFEF
CELTLKSRGS KSDKIQFKGG VVIITMPFHF ESHTIVSQDY GSLGNAISGI KQPRVKLESV
TFEAMFEVYS HDQHYARYLL SPAVMERLVE LEQLFRKTAR GSGISIEFKN NTVLIMASYF
GNLFDNVDIN LPTQDMSKIP LLQQELVLIT SIIKQLKLDY LAAQNVAAQK MHARMETLAS
|
|---|
| |