| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2510 |
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| Symbol | |
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| ID | 4253081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2986653 |
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| End bp | 2988620 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119145 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_734638 |
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| Protein GI | 113970845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0178218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000666167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAACG CACAAAAATC AAAAATCGCA CTACTGCTCG CAGCAAGTGT TGTCACTGTG
GCCTTAACCG GCTGTGGTGG AAGTGATGGT AACGATGGTA AACCCGGTGA ACCCGGTGGA
GAACCCGCTG GTTCCATCCA CAAGTTAAAC CTTGATATTA CTAAAGTAAA CTATGAAAAT
GGCTCACCTG TGGTCACTGT TTTCGCCACA AACGAAGACG ACCTTCCAAT TGTTGGTCTT
ACTAATTTAG AAATCAAAAA AGCACTGCAA TTAATACCTC AAGGGGCGAC TGGCCCTGGT
AATAGTGCTA ACTGGCAAGG GCTAGGCTCA TCGAAAAACT ATGTTGATAA TAAAAACGGT
AGTTATACCT TTAAATTCGA CACATTCGAT AGCAATAAGG TCTTTAATGC GCAATTAACG
CAACGTTTTA ACGTCGTGTC TGCAGCCGGA AAATTACCAG ACGGAACTTC GGTCCCCGTA
GCCGAAATGG TTGAAGATTT CGACGGCCAA GGTAATGCTC CTCTATACAC TAAAAATATT
GTCAGCCATG AAGTCTGTAC AACTTGCCAC GTGGAAGGCG AAAAGATTTA TCACCAAGCG
ACTGAAGTCG AAACGTGTAT TTCTTGCCAT ACGCAAGAAT TTGCGGATGG TCGCGGTAAA
CCCCATGTCG CCTTTAGTCA CTTAATTCAT AATGTGCACA ACGCCAACAA AGCGTGGGGC
AAAAATAATA AAGTTCCAGA AGTTGCACAA CATATAGTCC AAGATAATTG CCAAGTCTGT
CACGTAGAAT CTGACATGCT CACCGAGGCA AAAAACTGGT CACGTATTCC AACAATGGAA
GTTTGCTCTA GCTGTCACGT AGACATCGAT TTTGCTGCAG GCAAAGGCCA CTCTCAGCAG
TTAGATAACT CTAACTGTAT CGCTTGTCAC AACAGCAATT GGACTGCCGA GTTACACACA
GGCAAAACCG CTGAGAAGAA AGCTGTTATG GCTCAGTTAG GTATGTCTGC AACGCTTGCG
GGTCAAGAAG ACAATACTGC GGTATTAACT GTGACTGTCT TTGACAAAGA CGGTAATGCC
ATCGATGCAG CAAGCGTACA AGATAAGATC AAACGTTTAG AAACGATCAC TAACGTCGGT
CCTAACTTCC CGATCATGGG CTATAACCCA AGCCCAGTAA CTGGCTACAA GAAAGTGGCT
AAAGATCTGG TGAAAGATGG TGCACTGCAA GATGGTGTGA CCTTAGTTGA CGGTAAACTG
GTATTTACTA CTCCTGCACT GCCATTTGGT GCTGGCGATA CTGATACCGC CTTTACCTTT
ATCGGTCTGG AAATGTGTAA CACTGGCACC ACGCTGACGG CTTGTACTGC AGATAGCACA
ACCACCAGCA TGAAAGCCGA CTTAGTCTTC GGTACTAAAT CAAGTAATGC ACCCAGCATG
CGCCATGTGA ACTCAGTGAA CTTCAGCGCT TGTCAAAACT GTCACAGCGA AACCTTTGAA
ATCCATAAAG GTTACCATGC GGGCTTTGTG ATGACTGAGC AGGTTTCACA CTCGAAAGAT
GCCAGCGATA AACCTATTGT GGGTGTTGAT GCCTGTGTGA CTTGCCATAC ACCTGAGGGT
GCTGGTTATT CAGGCACTGG TATGGCATTA GAAATCCGTG CGCATAAAAC ACATGCTGAA
AAAGCCAATG GTCTTATTGG TGACAACTGT ACCCAATGTC ACAACGACTT CAACTTAGAT
GCATTTAAAG TCAAAGGTGC CATGGAGTTT AACAAAGGCA GCTACACCAC CCCAATCACG
GCAACTTGTA CTTCATGCCA CGCGCCAGAA TCTATTGGCC ACGGCTTAGA AAATATGGGC
GCGATTGTGA ACGGTGATTA TACTCAAGCC AACCAAGCGG CACAGTCAGA AACCTGTTTC
TACTGCCATA CCCCAACAGT TGCAGATCAC ACTCAAGTGA AAATGTAA
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| Protein sequence | MMNAQKSKIA LLLAASVVTV ALTGCGGSDG NDGKPGEPGG EPAGSIHKLN LDITKVNYEN
GSPVVTVFAT NEDDLPIVGL TNLEIKKALQ LIPQGATGPG NSANWQGLGS SKNYVDNKNG
SYTFKFDTFD SNKVFNAQLT QRFNVVSAAG KLPDGTSVPV AEMVEDFDGQ GNAPLYTKNI
VSHEVCTTCH VEGEKIYHQA TEVETCISCH TQEFADGRGK PHVAFSHLIH NVHNANKAWG
KNNKVPEVAQ HIVQDNCQVC HVESDMLTEA KNWSRIPTME VCSSCHVDID FAAGKGHSQQ
LDNSNCIACH NSNWTAELHT GKTAEKKAVM AQLGMSATLA GQEDNTAVLT VTVFDKDGNA
IDAASVQDKI KRLETITNVG PNFPIMGYNP SPVTGYKKVA KDLVKDGALQ DGVTLVDGKL
VFTTPALPFG AGDTDTAFTF IGLEMCNTGT TLTACTADST TTSMKADLVF GTKSSNAPSM
RHVNSVNFSA CQNCHSETFE IHKGYHAGFV MTEQVSHSKD ASDKPIVGVD ACVTCHTPEG
AGYSGTGMAL EIRAHKTHAE KANGLIGDNC TQCHNDFNLD AFKVKGAMEF NKGSYTTPIT
ATCTSCHAPE SIGHGLENMG AIVNGDYTQA NQAAQSETCF YCHTPTVADH TQVKM
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