| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2509 |
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| Symbol | |
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| ID | 4253080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2984125 |
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| End bp | 2986320 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119144 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_734637 |
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| Protein GI | 113970844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000184393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000632353 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAAC GGTTCAATTT CAATACCGCA ACAAAAGCGA TGTTGGGTGC CGGTTTACTT
TCACTTCTTC TCACTGGTTG TGGTGGCAGT GATGGTAAAG ATGGTGAAGA CGGTAAACCA
GGCGTTGTTG GTGTTAATAT CGACTCAACC TCAACGTTAA AAGCGAAATT CACAAATGCC
ACTGTTGATG CTGGTAAAGT CACCGTTGAT TTTACATTGG AAAATGCCAA TGGTGTGGCC
GTACTCGGCT TAACGAAAGA TCACGATTTA CGATTCGGTA TTGCTCAGCT CACCCATGTG
ACTGAAGCAA CGGACGATCC AGCTAAACCA GCGGATCGCG GCTATCAATG GCAAGCCTAT
ATCAATGCCA AAACTGAACC TGGTGCTATT CCATCGGGCG TCGATAACCT TAAACCTTCT
ACTCAATATA AAGCTAACGT TGAAGCGGCA AGTAAATGCG ACACATGCTT AGTTGACCAC
GGTGACGGTA GCTATAGCTA CACCTATCAG GCCAACATTG CCAATGTAAC TGAGCCACTC
ACAGTCACTT ACAGTGCCGA CGCGACTCAA CGCGCCACAA TGGAGCTTAA GCTACCACAA
CTTGCAGCAA ATGCGCATTT TGATTGGCAA CCTTCGACTG GTAAAACTGA AGGCATCCAA
ACTCGCAATG TCGTTTCTAT TCAAGCCTGT TACACCTGTC ACCAACCAGA AAGCTTAAAG
CTGCATGGTG GTCGTCGTAT TGATCTTGAA AACTGTGCCT CTTGCCATAC TGCAACTTCT
GGCGACTCAG AATCAGGCAA TAGCATAGAA TTTAGTTATA TGATCCATGC TATCCACAAA
GGAGCTGAGC GTCATACCTT CGATGAGACA GGCGCTGAAG TTCCAGCACC TTACAAGATT
ATTGATTACC GTGGTGCATT ACACGACTAC GGCAAAGTAA CTTTCCCATT AAAACCTGCC
GCGGACTGTT CAGCATGTCA CGTTGAAGGT GCGGGAGCGC CTGCGAATGC CGACCTATTC
AAAGCCGATT TAAGCAATCA AGCTTGTATT GGTTGTCACA CCGAAAAACC ATCTTCTCAC
CACAGCAGCA CTAATTGTAT GTCTTGCCAC AATGCCACCG AGCCTTACGG CGGTACTGGC
AGCGCGGCTA AGCGCCATGG TGACGTACTG AAAGCCTATT CTGATACTCA AGCAATGGGC
ATCAAGTTCA GCAATGTGGG TGTGAATGAC ACAGGTAAGA TTACCTTTGA TGTTCAAGTC
GTTGATAAAG ATGGCAACGC TATCGATAAA ACATTTGTAA ACCAAAGTTC ACGTGTAGTT
GTGGCATGGG ATTCTGATAA AGATTACCCA AGCTATGCAG ATGCCTCCTA CAGCAACCGT
CGTATCGCGC TGAGCGAAGG CACCTACAAT GAAGCAACCA AAACCTATTC CATAACTGGC
ACTAAGTTCA ATCTGCCAGC GGATGTTAAC GGTAAAACCT TTGAACTCTG GTCAGCATTA
GAAGTGTGTT TCAATAATGG TGGTTACGGT GTTGCCGAGG TAATTCTAAC TAATTGTGCA
GACGATACCG TACGTAAAGT GCCAGTGAAA GAAGCCCCTT ACCACTTTGT CTGGAAAGAC
AATGGTGTAG ATAGCGCAGC GTCTCCAGCT AGCCGTCGTC CTATTGTTGA CACTTCAAAT
TGTCAAGGCT GTCACAATCA GCAAGTTCTG CATTACGATA ACGGCGTGAA CTGCCAGACT
TGTCATACCC CAGACAAGGC GCTTAAAGAG ACGGTTCGAA ATTCAGGTAA GTTTGATCAA
GCAACCAGCT TTGCTTGGAA AGCCCATGAA GCAGAAGGTC ACTACCTGAA ATATGCTGGC
GTTCAATCAG GCACTGTTCT TAAGAGCGAT TGTGCAACTT GCCACGTCGA AAAAAGCGGT
GTCGTCACAG GTATTGAACT TGGCCGCGCT CCTGAGCGCA CATGGATTTA TCCAAACTCA
ACAACCTATG ATAAAGCGGG TGTTTGGGTA TCTTCAGATG CGGGAGCATG TTTAAGCTGT
CACCAGAAGT ATCTGTCTGA TGCGGCTAAG TCTCACATTG AAGCTAACGG CGGTATCTTA
GATGGTACCA GTTCAGCTGA TGTTCAAACC CGTGCCTCTG AAAGCTGCGC AACTTGCCAT
ACTCCAGCGC AATTAATGAA AGCACACGGT AACTAA
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| Protein sequence | MMKRFNFNTA TKAMLGAGLL SLLLTGCGGS DGKDGEDGKP GVVGVNIDST STLKAKFTNA
TVDAGKVTVD FTLENANGVA VLGLTKDHDL RFGIAQLTHV TEATDDPAKP ADRGYQWQAY
INAKTEPGAI PSGVDNLKPS TQYKANVEAA SKCDTCLVDH GDGSYSYTYQ ANIANVTEPL
TVTYSADATQ RATMELKLPQ LAANAHFDWQ PSTGKTEGIQ TRNVVSIQAC YTCHQPESLK
LHGGRRIDLE NCASCHTATS GDSESGNSIE FSYMIHAIHK GAERHTFDET GAEVPAPYKI
IDYRGALHDY GKVTFPLKPA ADCSACHVEG AGAPANADLF KADLSNQACI GCHTEKPSSH
HSSTNCMSCH NATEPYGGTG SAAKRHGDVL KAYSDTQAMG IKFSNVGVND TGKITFDVQV
VDKDGNAIDK TFVNQSSRVV VAWDSDKDYP SYADASYSNR RIALSEGTYN EATKTYSITG
TKFNLPADVN GKTFELWSAL EVCFNNGGYG VAEVILTNCA DDTVRKVPVK EAPYHFVWKD
NGVDSAASPA SRRPIVDTSN CQGCHNQQVL HYDNGVNCQT CHTPDKALKE TVRNSGKFDQ
ATSFAWKAHE AEGHYLKYAG VQSGTVLKSD CATCHVEKSG VVTGIELGRA PERTWIYPNS
TTYDKAGVWV SSDAGACLSC HQKYLSDAAK SHIEANGGIL DGTSSADVQT RASESCATCH
TPAQLMKAHG N
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