| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2508 |
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| Symbol | |
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| ID | 4253079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2981959 |
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| End bp | 2983878 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119143 |
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| Product | decaheme cytochrome c MtrF |
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| Protein accession | YP_734636 |
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| Protein GI | 113970843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00292179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000509076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAAGT TTGCAAGATT TAGCACACAA CTCAGTCTGT TGCTGGCCTT AACCACCCTT
CTGACCGCCT GCGGTGGTAG CGATGGTAAC GATGGCGATC CTGGCGAGCC TGGTAAACCA
CCGGCGATGA CGATCACTAG CCTAAACATC ATGGTCGATA AAGTCGCCGT GACCGACGGC
ATCGCCCAAG TCGATTATCA GGTGAGTAAC CAAGACGATG AAGCCGTAGT CGGTATTCCC
TCGGCCACCT TCATTGCGGC GCAATTACTG CCTCAGGGCG CGACAGGTGC GGGCAATAGC
AGTGAGTGGC AACATTTCAC CTCTGAAACG TGCGCCGCTT CTTGCCCAGG CACATTTGTC
GACTATAAAA ACGGCCATTA CAGCTATCGT TTCAGTGCCA CATTTAACGG CATGAATGGT
GTGAGCTTCC TTAACGATGC GACCCAACGA GTCGTCATTA AACTCGGCGG AGATGCATTA
GCCGATGGCA CTGCGCTCCC CATTACCAAT CAACACTACG ATTGGCAAAC CTCGGGTAAT
ACCCTAGCCT ACAGCCGTAA CTTAATCACT ATTGAAACCT GTAATAGCTG TCACAGTAAT
TTGGCGTTCC ATGGTGGCCG TTACAACCAA GTTGAAACCT GCGTAACTTG TCATAACAGT
AAAAAAGTCA GTGATCCTGC GGATATTTTC CCGCAAATGA TCCACAGCAA GCACTTAGCG
GGTTTCCCTC AATCCATCAG TAATTGCCAG ACTTGCCACG TTGATAATCC TGATTTAGCC
GAAGCTCAAA ACTGGCATAG AGTCCCCACC ATGGAAGCCT GTGGTGCCTG CCATACCCAA
ATTAACTTCC CTGCGGGCCA AGGCCATCCT GCGCAAGCAG ATAACAGCAA TTGCGTTGCC
TGCCATAATG CCGATTGGAC CGCCAGCGTA CACGGTAATG AAGGTCAAAC AGCCGCGTTA
GCCCAGTTTA GTCCTAGCAT CAGTAGCGCA AGTATGGATG CCAATGGCAC AGTGACAGTT
GCCGTGACGC TGAGCAATCC ATCCACCGGT ACTGTATACA GTGATAGCGC AGATAAGCTC
AAATTTATCA GCGATCTAAG GGTCTATGCT AACTGGGGAA CTAGTTTCGA TTACAGTACC
CGCTCCGCGC GCTCTATTCG TCTCCCCGAG TCCACACCAG TCTCTGGCAA CAACGGCACT
TACACTTATA CCATTTCGGG TCTCACGGTT CCGGCAGGAA CTGAAGCGGA CCATGGCGGC
TTAGCGATTC AAGGCCGAGT TTGCGCCAAA GATAAAGTAT TAGTGGATTG CAGCACTGAA
CTTGCCGAAG TTCTGGTTAT CAAGGCAAGC CATAGTTACT TTGATATGTC AGCCTTAAGT
ACCACCGGCA GACGCGAAGT CATTAGCAAT GCCAACTGTG CTAGCTGCCA CGGCGATCAA
CAACTGAATA TTCATGGCGC CCGTAATGAT TTAGCGGGCC AATGCCAGCT TTGCCACAAC
CCGAATATGC AGGCCGATGC CACAGCGGTA AATCCCTCCA TTACCTCCTT TGACTTTAAG
CAGTTAATCC ATGGGATCCA TACCAGCCAA TTTGCCGGTT TTGAAGACCT CAACTACCCA
GGCAAAATCG GTAATTGTGC TCAATGCCAT ATCAAAGATG CTGCAGGAGT TTCAACGGTT
GCCCTCCCCT TAAACGCGGC GGTTCAACCA CTTGCACTGA ACAACGGTAC CTTTACCAGC
CCAATAGCTG CGGTGTGCAG TAACTGTCAC TCAAGTGATG CCACACACAA CCATATGATG
CAGCAAGGTG CAGTATTTGC GGGAACAAAA GCAGATGCCA CCGCGGGCAC TGAAACCTGT
GCTTTCTGCC ACGGACAAGG CGCTGTCGCC GACGTTTTAA AAGTGCACCC TATTAAATAA
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| Protein sequence | MNKFARFSTQ LSLLLALTTL LTACGGSDGN DGDPGEPGKP PAMTITSLNI MVDKVAVTDG
IAQVDYQVSN QDDEAVVGIP SATFIAAQLL PQGATGAGNS SEWQHFTSET CAASCPGTFV
DYKNGHYSYR FSATFNGMNG VSFLNDATQR VVIKLGGDAL ADGTALPITN QHYDWQTSGN
TLAYSRNLIT IETCNSCHSN LAFHGGRYNQ VETCVTCHNS KKVSDPADIF PQMIHSKHLA
GFPQSISNCQ TCHVDNPDLA EAQNWHRVPT MEACGACHTQ INFPAGQGHP AQADNSNCVA
CHNADWTASV HGNEGQTAAL AQFSPSISSA SMDANGTVTV AVTLSNPSTG TVYSDSADKL
KFISDLRVYA NWGTSFDYST RSARSIRLPE STPVSGNNGT YTYTISGLTV PAGTEADHGG
LAIQGRVCAK DKVLVDCSTE LAEVLVIKAS HSYFDMSALS TTGRREVISN ANCASCHGDQ
QLNIHGARND LAGQCQLCHN PNMQADATAV NPSITSFDFK QLIHGIHTSQ FAGFEDLNYP
GKIGNCAQCH IKDAAGVSTV ALPLNAAVQP LALNNGTFTS PIAAVCSNCH SSDATHNHMM
QQGAVFAGTK ADATAGTETC AFCHGQGAVA DVLKVHPIK
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