| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2504 |
|---|
| Symbol | |
|---|
| ID | 4253075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2975853 |
|---|
| End bp | 2978147 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119139 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_734632 |
|---|
| Protein GI | 113970839 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00112841 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00221536 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC AGTTTCATTG CGTCACTGTT GGTAACCCAA ACGCGGGAAA ATCAACACTC
TTTAACGCGC TAACCGGCGC GAATCAGCAA GTGGGCAACT GGTCCGGTGT GACCGTTGAG
AAAAAAACCG GTCATTTTAC CCTTAATGGC GCCGACGTTT ACTTAACCGA CTTACCCGGT
ATTTACGATT TACTCCCCGC GGGTAATAGT TGTGATTGTT CCCTCGATGA GCAGATTGCT
CAGCAATACC TCGCCGAACA ACGTGTCGAT GGCATCATCA ACTTAGTCGA TGCGACCAAT
ATCGAGCGCC ACCTCTATCT GACGGCACAA CTACGTGAGC TGTCGATCCC TATGGTGGTG
GTATTGAATA AAATCGATGC GGCGATTAAG CGTGGGATCC GTGTCGATTT AAAGAAAATG
AGCCAAGAGT TAGGTTGCCC TGTCATTGGC GTGTGCTCTC GCGATCCCGC CGATGTGGCT
AAAGTGCAAG CGCAGGTTTT GGACTTACTC CAAGGCCGCG TATCCGAAGC GCCTCTGCTA
CTCGATTACG ACGAGCAAAT TGAAGCGGGC GTGCAACTCC TTTGCAGTAA AGACCCCAAC
TTAAGCCGTG GCCGCGCTTT AGCGATGCTG GGTAACGGTT CTGGTTGTGG CAGCTGCAAA
AATGCCGAGC TACAGGATGA AGTCAGCACT TGCACCGAGC AAATTGCACA GCAAGGGCAT
GACATCGAAG TGATGGTCGC TACGACGCGT TTTAACTTTG TTGAGCGTGT GTTCCAAGGT
TCCGTTAAGA CCGATGGTTT CCTCACGCTG AGCGATAAAC TCGATAAATT AGTCTTACAT
CCCGTGCTTG GCATTCCGGT GTTCTTATTT GTCATGTATC TGATGTTTAT GTTCAGCATT
AACATCGGTA GTGCGTTTAT CGATTTCTTC GACGTGTTTG TCGGGGCATT ACTGGTCGAT
CATTTTGGTG CATTCCTTGG CAATATGGGC GCGCCAGCAT GGTTGGTGAC GATTCTCGCG
GGTGGTGTCG GTCAAGGTAT TCAAACCGTT TCTACTTTTA TTCCGGTTAT CGCAGCGCTA
TTTCTCGGTT TATCTATCCT TGAAAGCTCA GGCTATATGG CCCGCGCGGC CTTCGTGGTG
GATGGCTTAA TGCGCCGTAT AGGCCTACCG GGTAAAGCGT TCGTGCCTAT GATTGTTGGC
TTTGGTTGTT CGGTGCCAGC GATTATGGCA ACACGTACTT TAGGCAGTGA GCGTGAGCGT
ATCGTGACAG GTATGATGGC GCCTTTTATG TCCTGCGGTG CACGTTTACC TGTGTATGCG
TTATTTGCGG CGGCGTTCTT CCCTGACTCT GGTCAAAACC TGGTGTTTTT ACTGTACGTG
ATTGGGATTT TTGCGGCGAT TGGTACAGGG TTATTACTGC GTAGCACCTT ATTACCAGGC
ACAAGCAGTG CGGTGGTGAT GGAGCTGCCA AGCTATGAAA TGCCTAAATT TAAAGCCGTG
ATGGTGCGTA CTGGTAAGCG GACGAAGAGC TTTATTCTTG GTGCGGGTAA AACCATCGTC
CTTGTGGTAA CTCTGCTTAA CTTTATCAAT GCGATTGGGG TCGACGGTAC TTTTGGCCAT
GAAGATAGCC AAGCCTCACT TTTGAGTGTG GCAAGCCAAA AAGTGACACC CATCTTTGCA
CCAATGGGGA TTGAGCAAGA TAACTGGCCA GCGACTGTGG GTATTATCAC GGGTATTTTC
GCTAAAGAAG CGGTCGTCGG TACGCTGAAT AGCTTATATA CCAATGTTGC CCATGAAGAT
GCAGAATTAA CGCCATTAGC GGATAGTTTC AGCGAAGCAC TAGCGACTAT CCCTGCAAAC
TTGTTCGGTT TAGATTTGGA AGATCCGCTT AAGCTATCTG TGGGTGATGT GTCCAGCACC
GACGTTGCCG CAGAGGCGCA AGGTGTAGCA ACGTCAACCT TTAGTGCGTT ACAGTCAGGC
TTTACCACTA CGGTGGCTGC GTTCTCTTAT CTGCTGTTTA TCTTACTCTA TACGCCGTGT
GTTGCTGCTA TGGGTGCCTT GGTACATGAG TTTGGCAGCC GCTGGGCAAC CTTTGCGGCA
ACTTGGACAT TCTCACTGGC CTACGGCAGT GCGACCATTG CTTACCAAGC GGCGACCTTT
AGCGCGCATC CGGTGCAATC GAGTCTGTGG ATTGGTTTCT TCCTCGTTGC TCTTGTGGTG
TTCTATCTGT GGCTTAAACG TAAAGGGCGC AGAACCCAAC AGATCATCCC TGGCATTAGG
ATTATTACCG AGTAA
|
|---|
| Protein sequence | MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG
IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELSIPMVV
VLNKIDAAIK RGIRVDLKKM SQELGCPVIG VCSRDPADVA KVQAQVLDLL QGRVSEAPLL
LDYDEQIEAG VQLLCSKDPN LSRGRALAML GNGSGCGSCK NAELQDEVST CTEQIAQQGH
DIEVMVATTR FNFVERVFQG SVKTDGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI
NIGSAFIDFF DVFVGALLVD HFGAFLGNMG APAWLVTILA GGVGQGIQTV STFIPVIAAL
FLGLSILESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER
IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRSTLLPG
TSSAVVMELP SYEMPKFKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGTFGH
EDSQASLLSV ASQKVTPIFA PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYTNVAHED
AELTPLADSF SEALATIPAN LFGLDLEDPL KLSVGDVSST DVAAEAQGVA TSTFSALQSG
FTTTVAAFSY LLFILLYTPC VAAMGALVHE FGSRWATFAA TWTFSLAYGS ATIAYQAATF
SAHPVQSSLW IGFFLVALVV FYLWLKRKGR RTQQIIPGIR IITE
|
|---|
| |