Gene Shewmr4_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2498 
SymbolcysS 
ID4253069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2969331 
End bp2970716 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID638119133 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_734626 
Protein GI113970833 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.73737e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0233858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT TGAAGATTTA CAATAGTATT ACCCGCCAAA AACAGGAATT TAAGCCAATT 
ACTCCCGGAA AAGTTGGGAT GTATGTATGC GGGGTGACCG TATACGATCT GTGTCATATT
GGCCATGGGC GTACTTTTGT TTCCTTCGAT ATGATCGTTC GCTACCTGCG TTACGCGGGT
TATGAAGTGA ATTTTCAACG TAACATCACC GATATTGATG ACAAAATCAT CAAACGCGCC
AACGAAAACC AAGAAGATTG CAATACATTA ACCGATCGCT TGATTGGTGA AATGCACAAG
GATTTCGATG CGCTGAATAT GATCCGTCCC GATTTCGAGC CCCGTGCCAC TCTGCACATT
ACCGAAATCA TCGATATGGT TGAGCGTTTA CTGGCCCGTG GTCATGCCTA TGTGGCAGCC
GATGGCGATG TGCTGTTCAG TGTGGCCTCT TTCCCTGAGT ACGGCCGTCT ATCAGGTCAG
AACCTGGAGC AATTACAGGC GGGGGCACGG GTTGAGGTTG ACGATAACAA GCAAAATCCA
ATGGATTTCG TGCTGTGGAA AATGTCTAAA CCGGGCGAGC CAACATGGGA GTCGCCATGG
GGGCCGGGCC GTCCAGGCTG GCATATCGAA TGTTCGGCAA TGAACAGCAA GCACTTAGGC
CTGCATTTCG ATATTCACGG TGGCGGTTCA GATTTACAAT TTCCTCACCA TGAGAACGAA
ATTGCTCAGT CTTGCTGCGC CCATGATACG CCGTACGTGA ATTACTGGAT GCACACTGGC
ATGGTGATGG TTGACCGCGA GAAGATGTCA AAGTCTTTAG GTAACTTCTT CACTATTCGT
GATGTATTAG GCCATTACGA TCCTGAAACC GTGCGTTACT TCCTGCTATC GGGTCACTAC
CGTAGCCAAA TCAACTATTC AGAAGAAAAC CTCAAGCAGG CGCGTGCCGC CTTAGAGCGT
TTATACACTG CGATTAAAGA TGTTGACCTG ACTGTAGCGC CGGCACCTGC CGAAGAGTTT
GTCGCTAAGT TTAAAGCGGC AATGGACGAT GACTTTAATA CGCCAGAAGC CTACTCAGTG
CTGTTTGATA TGGTACGTGA GATCAACCGT TTGAAAACCA CCGATATGGC GCAGGCTTCA
GCTATGGCTG TTGCCATGAA GCAACTGGCC GATGTATTGG GATTATTGCA CCAAGCGCCC
GATGCCTTCT TTAAAGGCGA GGGTAGCGAT GATGAAGTGG CAGAGATTGA AGCGCTGATC
GTTGAGCGTA ATCGTGCCCG CGTCGAAAAA GATTGGCCTG CGGCTGATGT TGCGCGTAAT
CGTTTAAATG AGCTTGGTGT GGTGTTAGAA GATGGCCCAA GCGGTACTAC TTGGCGTAAG
AAATAG
 
Protein sequence
MPMLKIYNSI TRQKQEFKPI TPGKVGMYVC GVTVYDLCHI GHGRTFVSFD MIVRYLRYAG 
YEVNFQRNIT DIDDKIIKRA NENQEDCNTL TDRLIGEMHK DFDALNMIRP DFEPRATLHI
TEIIDMVERL LARGHAYVAA DGDVLFSVAS FPEYGRLSGQ NLEQLQAGAR VEVDDNKQNP
MDFVLWKMSK PGEPTWESPW GPGRPGWHIE CSAMNSKHLG LHFDIHGGGS DLQFPHHENE
IAQSCCAHDT PYVNYWMHTG MVMVDREKMS KSLGNFFTIR DVLGHYDPET VRYFLLSGHY
RSQINYSEEN LKQARAALER LYTAIKDVDL TVAPAPAEEF VAKFKAAMDD DFNTPEAYSV
LFDMVREINR LKTTDMAQAS AMAVAMKQLA DVLGLLHQAP DAFFKGEGSD DEVAEIEALI
VERNRARVEK DWPAADVARN RLNELGVVLE DGPSGTTWRK K