| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2469 |
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| Symbol | |
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| ID | 4253040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2935779 |
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| End bp | 2938211 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119101 |
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| Product | DNA polymerase II |
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| Protein accession | YP_734597 |
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| Protein GI | 113970804 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00196726 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000569309 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATCCCC CCGAGAGTCT GACGCCTGAA ACGGCTGCGC CAGTGAGTGT ACAGGGACGC
GTCCTCACGC GCCATGCTAT TACGCGTGGT GCAACGCTTG TGCTGCAGTA TTATCTCGCC
ACCGTTTCAG GCCCTGTGCT GGTGGAGTTA CCTGGCTCTG AGTACATTTG TTTTTGTCAT
CAAAGCGATA TGTCGGCATT GCAGTTACAA ACGCCGGGGC AGGCACTGCG CTTTGTACCG
CTTGCACTTA AAAGCTTTAA AAGACAATCC GTGGCGGCGA TTTATGCCCA GTCGAGCAGT
GTGTATCGTC ACTTACAGCG GATAGCGACG GATGCTGGCA TTCCCTTATT TGAGGCGGAT
ATCCGTCCCG AGCAGCGTTT TTTAATCGAG CGTTTTGTCG CGCTCGATGT GGCATTTTTA
GGGCATTTTG TCAGCAACGC TGGCATAGAT GAACAATTGC CCATTTTTAG CGCTGTACGC
GCGAAAGCCG TTGCGCCGCA GCCAGAAATA AAATTGCGTT CAATCTCCCT CGATTTTGAA
TGCAGTTTTG ACGGATTACT CTATTCCGTG GCCCTTTATG GGCGCGATGC GCAATCTCAG
CCCTATGAAA AAGTCATTAT GGTGGGTGAG CCGCAGCTTG ATGCTGCAAT CTACATCGAA
TGGGTGAGCG ATGAAGCGGC GCTTATCCAT CGTCTCATCG CTTGGTTTAC TGAGTTTGAT
CCCGATGTGA TCATTGGTTG GTCTGTGGTG ACCTTTGATT TGGCCCTATT ATATCGGCGT
GCGTTGCTGC ACCGGATCCC GCTGCGTATC GGCCGCGGTG GCGCGCTTCT CGAATGGAAG
GTTGAAAATA AATTTCGGCC AGAAACCTTA AGCTTGCCGG GAAGAGTGGT GCTCGATGGT
ATCGATTGGT TAAAGGCGGC CTTTTATCAA TTCGAACGTT TCTCCTTGGA GTTTGTTGCC
CAAACTTTAC TCGGTGAAGG CAAAGCGATT CATGATGTAG AAAATCGATC CCAAGAGATT
GATGCGCTAT TTGCCGAAAA TAAACAAGGG CTTGCACATT ATAATCTCAC CGATAGCCGC
TTAGTGTGGG ATATCTTCGA GCATACTCAA TTGTGGGACT TTGCCCTTGC TCGCGCCGAG
TTAACGGGGT TAGAACTCGG GCGCGTAGGT GCGTCAGTCG CGGCATTTAA TCATCTGTAT
TTACCGCATT TACATAGAGC AGGCTTCGTT GCGCCCGCAG AGCCGGCCAG CCAAGGAATT
GAAAGCCCTG GCGGTTATGT GATGGATTCT GTCCCTGGGT TCTACCAGCA TATTTTAGTG
TTTGACTTTA AAAGTCTTTA TCCATCAATT ATCCGGACTT TTTTGATAGA TCCTAAGGGA
TTAATTGAAG GCTTGGATAA CAGTGAGGAA CAGGCTTTGG ATGAGGCTGA AATTGTTCCT
GGCTTTTTAG GCGCTCGTTT TAATCGGCAG CAACCGATCC TGCCAAAACT TATTCAGAAC
CTCTCCGAAC AGCGAGAAAA AGCCAAGCGG GAGGCGAATG CGCCTTTATC GCAAGCGATT
AAAATCATTA TGAATTCGCT TTATGGGGTT TTAGGTTCCC AAGGCTGTGT GTTCCATGAT
GCGAAACTGG CAAGCTCCAT CACCATGCGT GGTCATCAAA TCATGAAGCA AACCCGAGCT
TGGATCGAGG AGATGGGCTA TCAAGTGATT TATGGAGATA CTGACTCTAC CTTCGTCTAT
TTAGGCCCAG AGCCAGATCT CAGTGATATT AATGCCTTAG GTAAACAGAT TGCTGCGCAA
ATCAATCAGC AATGGCAGAG TAAAATCGCA AAGGATTTTC AGCTAGAAAG CTTCCTCGAA
TTGCAGTTTG AACGCCATTA CGAACAGTTT TTTATGCCGA CCCTGCGGGG CTCGGAGGAG
GGCAGTAAGA AGCGTTATGT TGGTGCTTGG CGCAATAAGG ATGGTGCGCT AGAAATCACT
TTTAAGGGGA TGGAGCAGGT TCGCAGTGAT TGGAGCCCCT TGGCGCGAAA GGTGCAAGCC
GAACTCTACG AACGTATGTT TAATCAACGG GATATAAGTG GCTATTTGAC GGACGTGATA
GGCGAACTGC AGGCTGGGAA GCGTGATAAT GAGTTAGTTT TTAGCAAACG TATGCGCCGT
AATCTAGACG AATACACTGC CAAGTCTTCT CCCCATGTGA AAGTCGCACG TCAGCTTTGT
GAGTTAACAG GAAAGGCATC CTATGGCAAG AGAGGCGCGC AGATTGATTA TGTGATCACT
GTAAACGGTC CTGAACCAGT TTCGTATAGA TCGTCTACAA TTGATTATCA ATACTACGTT
GATAAGCAGA TTACTCCTAT TGCAGAGCCA GTTTTTTCAA TTATGAAATT AAATTACACA
CAGATTGCCT CTAAACAGCT GTTGTTAATT TAG
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| Protein sequence | MNPPESLTPE TAAPVSVQGR VLTRHAITRG ATLVLQYYLA TVSGPVLVEL PGSEYICFCH
QSDMSALQLQ TPGQALRFVP LALKSFKRQS VAAIYAQSSS VYRHLQRIAT DAGIPLFEAD
IRPEQRFLIE RFVALDVAFL GHFVSNAGID EQLPIFSAVR AKAVAPQPEI KLRSISLDFE
CSFDGLLYSV ALYGRDAQSQ PYEKVIMVGE PQLDAAIYIE WVSDEAALIH RLIAWFTEFD
PDVIIGWSVV TFDLALLYRR ALLHRIPLRI GRGGALLEWK VENKFRPETL SLPGRVVLDG
IDWLKAAFYQ FERFSLEFVA QTLLGEGKAI HDVENRSQEI DALFAENKQG LAHYNLTDSR
LVWDIFEHTQ LWDFALARAE LTGLELGRVG ASVAAFNHLY LPHLHRAGFV APAEPASQGI
ESPGGYVMDS VPGFYQHILV FDFKSLYPSI IRTFLIDPKG LIEGLDNSEE QALDEAEIVP
GFLGARFNRQ QPILPKLIQN LSEQREKAKR EANAPLSQAI KIIMNSLYGV LGSQGCVFHD
AKLASSITMR GHQIMKQTRA WIEEMGYQVI YGDTDSTFVY LGPEPDLSDI NALGKQIAAQ
INQQWQSKIA KDFQLESFLE LQFERHYEQF FMPTLRGSEE GSKKRYVGAW RNKDGALEIT
FKGMEQVRSD WSPLARKVQA ELYERMFNQR DISGYLTDVI GELQAGKRDN ELVFSKRMRR
NLDEYTAKSS PHVKVARQLC ELTGKASYGK RGAQIDYVIT VNGPEPVSYR SSTIDYQYYV
DKQITPIAEP VFSIMKLNYT QIASKQLLLI
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