Gene Shewmr4_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2457 
Symbol 
ID4253028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2920127 
End bp2921956 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content47% 
IMG OID638119089 
Producthypothetical protein 
Protein accessionYP_734585 
Protein GI113970792 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.339e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAATTAA GTTTATTGGC GGGAACGATA GCGTTAGTGT TTGCTTTACA AGGCTGCTCA 
AAGCCGGAAA CAACGGCTGC GGTACAAGAA GGCTCGACCC AAGCCGCTTC GGCGCAAACT
GAAACTCAAA CCGCAGAGTC TAAATACGTC GCCTTAGTCG ATGCCTATTT TAAAGATTAC
TTAAAGTTAG AGCCGATTTA CGCCACTTTT GTCGGTGTTA ATGACTACAA TGCGCAGTTC
GGCGGAGACT TGACCGAGGA ATATCTTAAG GCGCGTCATG ATCTTAATAC CCGCTATTTA
GCACAAGTGA GGGCGATTGA CCTTGAGCAA TTGCCAGCCG ATTTACAACT CAGTTACGCG
CTGTTTGTTT ATGACCGCGA AATGGCTTTA GTCGATGAAA CTTACCCATC ACGCTTTATG
CCGATCAGCC AGTTCTACAG TACTGTGATC ACTATGGTGC AACTGGGTAG TGGTGAGAGT
GCGCAGCCGT TTAACACAGT GCAGGATTAT CGTAACTGGG AGCAGCGCGT TAACGGCTTT
ATTGATTGGA TCCAATTGGC CGAAAATCGT ATGGACGAAG GTATTGCCAG CAAAGTGGTG
TTACCTCGCG TGTTAGTCGA GCGGGTTATT CCACAGCTAG ATGCCATGCT CACAACAGAT
GCTAGCCAAA GTATTTTCTA TTCACCGATT AATCACTTCC CAGAAGGGTT TTCGGATCAA
GATAAAGCAG AGCTAACAGC AAGTTATCAG GCGATGATTA ATGAGCGTTT AGTGCCTGCA
TTAACGGGGC TGCGCGATTA CTTCAAGCAG ACTTATTTGC CTAAGTCCCG CGCGACGGAC
GGTTGGTCTG GTCTACCAAA CGGTAAGGCT TGGTATCAGC ATTTAGCCAA TTCTCATACC
ACCACAACCA TGCCAGTGGA TGAAATTCAT CAAATCGGCC TGAATGAGGT CGCACGTATT
CTTTCTGAGA TGGACAAAGT GCGTGAGCAA GTGGGTTTTA AAGGTGACTT AAAAGCCTTT
TTTGCCTCTT TATCGTCTGA GCCACAATAC TTCTATGGCG ATCGCCAAGG CTTAATCGAT
GGTTATATGG TGTTGAAAGA TAAGATTAAC CAAGTATTGC CACAGTATTT TAATGTAATG
CCAAAGGCCG ACTATGTGGT TAAACCGGTT GAAAGCTTTA GAGAGCAATC TGCTGCGGGT
GCTTCCTATG AATCACCCGC TGTGGATGGG AGCCGTCCTG GGGTGTTTTA TATCAACACC
TATAACCTAA AAGCTCAGCC GAAATGGGGT ATGACGACCT TGTCATTACA TGAGGCCGCG
CCTGGCCACC ATTTCCAAAT CGCCATTAAG CAAGAGCTAA CAGGCGTTCC TGAGTTCCAA
CGTTTCAGTG GCTATACCGC CTTCGAAGAG GGCTGGGCGC TGTATGCTGA ATACTTAGGC
ATCGAAATGG GGCTCTTTAG CGACCCTTAT CAGTACTTTG GTAAGCTTTC AGACGAAATG
CTGCGTGCGA TGCGTTTGGT GGTGGATACG GGATTACATG CCAAAGGTTG GAGCCGCGAA
CAAGCGATTC AATATATGAA GGATAATTCG CCCATGGCCG AGTCGGATAT TATTGCCGAG
GTTGAACGTT ACATGGCGAT TCCGGGTCAA GCACTCTCCT ACAAAGTGGG CCAGCTAAAA
ATCCTAGCCC TACGTGAGCG TGCTGAAAAA GCCCTGGGTG ATAAGTTTGA CCTTAAGGCT
TTCCATGATC AGATCCTGAC CTCTGGCTCA TTACCTATGG CGGTGATGGA GCAGAAGATC
GACCGTTGGA TTGCTGCGAC TAAGGCTTAA
 
Protein sequence
MKLSLLAGTI ALVFALQGCS KPETTAAVQE GSTQAASAQT ETQTAESKYV ALVDAYFKDY 
LKLEPIYATF VGVNDYNAQF GGDLTEEYLK ARHDLNTRYL AQVRAIDLEQ LPADLQLSYA
LFVYDREMAL VDETYPSRFM PISQFYSTVI TMVQLGSGES AQPFNTVQDY RNWEQRVNGF
IDWIQLAENR MDEGIASKVV LPRVLVERVI PQLDAMLTTD ASQSIFYSPI NHFPEGFSDQ
DKAELTASYQ AMINERLVPA LTGLRDYFKQ TYLPKSRATD GWSGLPNGKA WYQHLANSHT
TTTMPVDEIH QIGLNEVARI LSEMDKVREQ VGFKGDLKAF FASLSSEPQY FYGDRQGLID
GYMVLKDKIN QVLPQYFNVM PKADYVVKPV ESFREQSAAG ASYESPAVDG SRPGVFYINT
YNLKAQPKWG MTTLSLHEAA PGHHFQIAIK QELTGVPEFQ RFSGYTAFEE GWALYAEYLG
IEMGLFSDPY QYFGKLSDEM LRAMRLVVDT GLHAKGWSRE QAIQYMKDNS PMAESDIIAE
VERYMAIPGQ ALSYKVGQLK ILALRERAEK ALGDKFDLKA FHDQILTSGS LPMAVMEQKI
DRWIAATKA