| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2441 |
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| Symbol | |
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| ID | 4253012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2902458 |
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| End bp | 2904575 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119073 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_734569 |
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| Protein GI | 113970776 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000573147 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGTCG TGATCAAGCG GGATGGTTGC CGCACACCTT TTGATGAAAC AAGGATAAGA
GATGCAGTGA TAGCGGCTGC AAACTCGGTT GGGATAGAGG ATGCTGACTA TGCCGCGACG
GTTGCCGCTT GTGTGAGGGA GCGAGTGGCC AATCTGGCAG AAGTCGAGAT CCACCATTTA
CAGGATGCGG TTGAAAACCT ACTGATGGAA GGGCCTTACA AGTCTCTGGC GCGGGTATAT
ATCGAGTATC GCCATGACAG AGATATTTGC CGCGATGCGA CCAGTAAACT CAATCTTGAA
ATCCGTGGTT TAGTGGAGCA GAGCAATGCG GCGCTGTTAA ATGAAAACGC CAATAAAGAC
TCTAAAGTGA TCCCAACCCA GCGCGATCTA CTCGCGGGTA TCGTCGCTAA ACATTACGCC
AAGAGCCATA TTCTGCCTAA GGATGTGGTG GCCGCCCATG AACTTGGTGA AATCCATTAC
CACGATCTCG ATTATTCGCC GTTTTTCCCG ATGTTTAACT GCATGTTGAT TGATTTGGCG
GGCATGTTGA CCCACGGTTT TAAGATGGGC AACGCCGAAA TTGAGACCCC AAAGTCCATC
TCCACCGCTA CGGCGGTAAC GGCGCAGATC ATTGCCCAAG TGGCCAGTCA TATTTATGGC
GGCACCACGA TTAATCGTAT TGATGAAGTG CTCGCGCCTT TTGTGGCGAA GAGCTATGAC
AAACACTATC AAGTGGCACT TAACTGGCAA ATTAAAGACG CCAAGGCCTA TGCGACGGCG
CTCACCGAAA AAGAATGTCA TGACGCTTTC CAATCCCTTG AATATGAAGT GAATACCTTA
CATACCGCCA ATGGACAAAC GCCCTTTGTG ACTTTTGGTT TTGGTCTGGG GACTTCGTGG
GAGTCGCGTT TAATTCAGCA ATCCATGTTG AAAGTTCGTA TGACGGGCCT AGGTAAAAAT
CGTAAGACTG CCGTGTTCCC TAAACTGGTG TTTGCGATTC GTGATGGCAT TAACCACAAG
GCTGGTGATT GCAACTACGA TGTCAAACAA ATGGCTCTTA AATGCGCCAG CATGCGCATG
TATCCGGATA TTTTGAACTA CGAGCAAGTG GAAAAGGTCA CGGGTTCATT TAAAACCCCT
ATGGGCTGTC GCAGCTTTTT AGGCTCCTAT AAAGAAAATG GCGAGCTAGT TCATGAAGGG
CGCAATAACC TTGGGGTGGT GAGCTTAAAC TTGCCCCGAG TTGCCCTCGA GGCCAATGGC
GATGAGGCTG AATTTTATCG CATTTTAGAT GAGCGTTTAC TGCTTGCCCG CCGCGCATTA
GACACCCGCA TCGAACGATT AAACGGCGTT AAAGCCAGAG TTGCACCGAT TCTGTATATG
GAAGGCGCCT GTGGTGTGCG CCTGCGCGCC GATGATGATA TCGCCCAAAT CTTTAAAAAT
GGTCGGGCAT CGATTTCATT AGGCTATATC GGTTTGCATG AAACCATCAA TGCGCTCTAT
GGCACACAAA CCCATGTATT TGATGATACC AAGCTTCGTG AAAAAGCAGT GGCGATTGTC
GCGCACCTTA AAGCGGCTAC CGATGCATGG AAGGCCGAAA CCGGTTATGG GTTTAGCCTT
TATAGCACCC CGAGTGAGAG CCTCTGCAGC CGTTTCTGCA AGCTCGATGC GCGTCAATTC
GGCGTGGTTG CAGGGGTCAC CGATAAGGGC TATTACACCA ATAGCTTCCA CTTGGATGTG
GAAAAGCGGG TGAATCCCTA CGATAAAATT GATTTTGAGC AGCCATATCC TGCGATCGCC
AATGGCGGAT TTATCTGCTA CGGCGAATAC CCGAATATGC AGCACAACAT CGAAGCGCTC
GAAAATGTGT GGGATTACAG TTATAGCCGC GTGCCTTACT ACGGTACTAA CACGCCGATT
GATGAATGCT ACGACTGCGG TTTTACCGGC GAGTTTAGCT GTACCAGTAA AGGTTTTACT
TGCCCTAAAT GCGGTAACCA TGAGCCAAGC CGAGTGTCCG TTACCCGCCG AGTGTGCGGT
TACTTAGGTA GCCCCGACGC CAGACCATTC AACCATGGCA AGCAAGAAGA AGTGAAACGC
AGGATCAAAC ACTTGTAA
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| Protein sequence | MPVVIKRDGC RTPFDETRIR DAVIAAANSV GIEDADYAAT VAACVRERVA NLAEVEIHHL
QDAVENLLME GPYKSLARVY IEYRHDRDIC RDATSKLNLE IRGLVEQSNA ALLNENANKD
SKVIPTQRDL LAGIVAKHYA KSHILPKDVV AAHELGEIHY HDLDYSPFFP MFNCMLIDLA
GMLTHGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD
KHYQVALNWQ IKDAKAYATA LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQQSML KVRMTGLGKN RKTAVFPKLV FAIRDGINHK AGDCNYDVKQ MALKCASMRM
YPDILNYEQV EKVTGSFKTP MGCRSFLGSY KENGELVHEG RNNLGVVSLN LPRVALEANG
DEAEFYRILD ERLLLARRAL DTRIERLNGV KARVAPILYM EGACGVRLRA DDDIAQIFKN
GRASISLGYI GLHETINALY GTQTHVFDDT KLREKAVAIV AHLKAATDAW KAETGYGFSL
YSTPSESLCS RFCKLDARQF GVVAGVTDKG YYTNSFHLDV EKRVNPYDKI DFEQPYPAIA
NGGFICYGEY PNMQHNIEAL ENVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT
CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NHGKQEEVKR RIKHL
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