Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2414 |
Symbol | |
ID | 4252985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2875689 |
End bp | 2876393 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119046 |
Product | hypothetical protein |
Protein accession | YP_734542 |
Protein GI | 113970749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00806149 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAGA GTTTAGTGAC AAATGTGTTG GCTGCCATTT GCGTGGTATT GGGATACGCA TTGAGTCTGC CCATTTTGTT TAATGTCGGT TTGTTTGCCT TATCTGGCGC GATGACTAAC TGGCTTGCTG TGTATATGCT GTTTGAAAAG GTGCCCGGTT TATATGGTTC GGGTGTAGTG CCATCGCGTT TTGAAGAGTT CAAAGCCGGC ATTGCACATC TTATGATGAA GCAGTTCTTC ACGACGGAAA ATATCGACCG TTTTCTGTCG GAAAAAGAAG GAATTAGCCA AATCGATTTA GCCCCTGTGA TTGATAAAGT GGACTTGGCG CCATCCTTCG ATGCCTTAAT TAACACAGTG GCACAATCTT CCTTCGGGGG CATGTTATCC ATGTTTGGCG GAACTGAGGC GTTAATGCCG TTAAAGGAAC CCTTTATCGA GAAGATGAAA GCCTCTTTGG TGGAAATGTC CCAGAGTGAG CAGTTCCGTA ATTTATTGAA ACAAGAGATA GAGCAGCCAA ATGTGATGGC CGATCTGCAA ACGAAGATCG CCAATATCGT TGAACAACGC CTGAATGAAT TAACCCCGCA AATGGTTAAA CAAATCGTGC AGGAGATGAT CCAAACGCAT TTAGGTTGGC TCGTAGTGTG GGGCGGGGTA TTTGGTGGCG CTATCGGACT TGTCGCCGCG CTGGTACAGG GTTAA
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Protein sequence | MNKSLVTNVL AAICVVLGYA LSLPILFNVG LFALSGAMTN WLAVYMLFEK VPGLYGSGVV PSRFEEFKAG IAHLMMKQFF TTENIDRFLS EKEGISQIDL APVIDKVDLA PSFDALINTV AQSSFGGMLS MFGGTEALMP LKEPFIEKMK ASLVEMSQSE QFRNLLKQEI EQPNVMADLQ TKIANIVEQR LNELTPQMVK QIVQEMIQTH LGWLVVWGGV FGGAIGLVAA LVQG
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