Gene Shewmr4_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2414 
Symbol 
ID4252985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2875689 
End bp2876393 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID638119046 
Producthypothetical protein 
Protein accessionYP_734542 
Protein GI113970749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00806149 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAGA GTTTAGTGAC AAATGTGTTG GCTGCCATTT GCGTGGTATT GGGATACGCA 
TTGAGTCTGC CCATTTTGTT TAATGTCGGT TTGTTTGCCT TATCTGGCGC GATGACTAAC
TGGCTTGCTG TGTATATGCT GTTTGAAAAG GTGCCCGGTT TATATGGTTC GGGTGTAGTG
CCATCGCGTT TTGAAGAGTT CAAAGCCGGC ATTGCACATC TTATGATGAA GCAGTTCTTC
ACGACGGAAA ATATCGACCG TTTTCTGTCG GAAAAAGAAG GAATTAGCCA AATCGATTTA
GCCCCTGTGA TTGATAAAGT GGACTTGGCG CCATCCTTCG ATGCCTTAAT TAACACAGTG
GCACAATCTT CCTTCGGGGG CATGTTATCC ATGTTTGGCG GAACTGAGGC GTTAATGCCG
TTAAAGGAAC CCTTTATCGA GAAGATGAAA GCCTCTTTGG TGGAAATGTC CCAGAGTGAG
CAGTTCCGTA ATTTATTGAA ACAAGAGATA GAGCAGCCAA ATGTGATGGC CGATCTGCAA
ACGAAGATCG CCAATATCGT TGAACAACGC CTGAATGAAT TAACCCCGCA AATGGTTAAA
CAAATCGTGC AGGAGATGAT CCAAACGCAT TTAGGTTGGC TCGTAGTGTG GGGCGGGGTA
TTTGGTGGCG CTATCGGACT TGTCGCCGCG CTGGTACAGG GTTAA
 
Protein sequence
MNKSLVTNVL AAICVVLGYA LSLPILFNVG LFALSGAMTN WLAVYMLFEK VPGLYGSGVV 
PSRFEEFKAG IAHLMMKQFF TTENIDRFLS EKEGISQIDL APVIDKVDLA PSFDALINTV
AQSSFGGMLS MFGGTEALMP LKEPFIEKMK ASLVEMSQSE QFRNLLKQEI EQPNVMADLQ
TKIANIVEQR LNELTPQMVK QIVQEMIQTH LGWLVVWGGV FGGAIGLVAA LVQG