| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2408 |
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| Symbol | rrmA |
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| ID | 4252979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2870642 |
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| End bp | 2871457 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119040 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_734536 |
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| Protein GI | 113970743 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0949625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATA TATGTCCTTT GTGTGCTTTG CCGCTCACCT TGATTGAACG AACTTGGGGA
TGCCCGCAGG CACACAAGTT CGACATGGCC AAAGAAGGTT ATGTGAATCT GCTCCCCGTG
CAGAAGAAAA ATTCCAAAGA TCCCGGTGAT AATCAGCAGA TGATGTTGGC TCGCAGGGAG
TTTTTAAATG CGGGTTACTA TCAAAGTTTA AGTGACAGAG TGAATGCGTT GGCACTTGAG
TATGCCAGCG AGGCGCAGCG GATCCTAGAT ATCGGCTGTG GTGAGGGGTA TTACAGCCAT
CGTCTATACG ATACTCTGGC AGCTGGTCAT CCTTGCCTAT TACAAGGTGT TGATATCTCT
AAATCGGCAA TAAAATATGC CGCCAAACGT TATCCTGGCT TAAGCTTTTG TGTGGCGAGT
GCCTACGAAA TGCCAATTCC AGCCAACAGC ATCGATTTAG CGATTCGCAT TTATGCCCCA
TCAAAGGTGG AAGAATTACA GCGGATCATG GCGACTGGCG GGATACTGAT CACTGTGTCA
CCTGGGCCTT TACATCATTT TGCGTTGAAA CAGCAAATTT ATGCTGAACC TAGATTACAT
CCAGTGTCAG ATGCAAAGAT AGCAGGCTTC GACTGCTTAC ATCAAGAGCG GCTAAGGTCA
CAACTTGAGC TAAATATCAG CGAAGATATT AGCCATTTTC TTGAAATGAC TCCCTATGCT
TGGAAGTTTT CTGCGGAACA AAAGCAAGCA TTTGCTCGAA GTGGGTTAAG CTGCGAATTA
GATTTTCAGA TTGAAGTACA TCGCATTTCA GTCTAG
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| Protein sequence | MQYICPLCAL PLTLIERTWG CPQAHKFDMA KEGYVNLLPV QKKNSKDPGD NQQMMLARRE
FLNAGYYQSL SDRVNALALE YASEAQRILD IGCGEGYYSH RLYDTLAAGH PCLLQGVDIS
KSAIKYAAKR YPGLSFCVAS AYEMPIPANS IDLAIRIYAP SKVEELQRIM ATGGILITVS
PGPLHHFALK QQIYAEPRLH PVSDAKIAGF DCLHQERLRS QLELNISEDI SHFLEMTPYA
WKFSAEQKQA FARSGLSCEL DFQIEVHRIS V
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