Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2406 |
Symbol | |
ID | 4252977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2868067 |
End bp | 2869644 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119038 |
Product | sulphate transporter |
Protein accession | YP_734534 |
Protein GI | 113970741 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.181309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACA GAGGTTTCAT GTTCGATCTC TTTCGCCACA AAACATCTAG TCACAAAGCC GATATCCTCT CGGGTCTGAC GGTCGCACTT GCACTTATTC CAGAAGCGGT AGCCTTTGCC TTTGTCGCCA ATGTCGAACC TATGGTCGGC CTCTATGCCG CCTTTATAAT GGGATTAGTT ACCGCACTGA TTGGCGGACG CCCAGGCATG ATTTCTGGCG CGACGGGAGC GATGGCCGTA GTGATGGTGT CATTGGTAGT TGAACATGGC GTGCAATACT TATTTGCCGC TGTGGTGCTG GCAGGATTAA TCCAAATCAG CGCTGGGGTC TTTAAACTGG GGAAGTTTAT CCGCATTGTC CCCTATCCTG TGATGATAGG TTTTGTGAAC GGCCTCGCCA TTGTGATTTT CTTGGCTCAG CTCGGGCAAT TTAAAGTCAA AAATGCCGCA GGGGAATTAG TCTGGCTACC GCAAGAGCCT TTGATGCTAA CGCTAGGGCT AGTCGCACTG ACTATGGCGA TTATTTACTT TCTCCCCAAA CTGACTACAG CTGTGCCCTC ATCGTTAGTT GCGATTCTAA GCGTGACCGC CATCGTGGTC GGTTTTGACT TAGACACCCG AAATGTGTTG GATTTTCTTA AAACCATGAG TGGCGATGAG CATGCGACCA TCGCAGGTTC ACTTCCAAGC TTTGCGATCC CACAGGTGCC GTTTAACCTT GAGACGCTCT ATATTATTCT ACCCTATTCC TTTATTTTAG CCGCCGTCGG ATTAATCGAA TCCCTGTTAA CCTTAACGGT TATCGATGAG ATGACCAATA CCCGCGGACG TAGCAATAAA GAATGTATAG GCCAAGGCGT GGGTAACATC ACCAGCGGCT TTTTTGGAGC CATGGGCGGC TGCGCTATGA TTGGTCAATC GATGATTAAC ATTAACTCAG GTGGACGTGG CAGATTATCC GGTATTACAG CGGCTATCGG TTTACTGACC TTTATCCTGT TTGGTGCATC TTTTATCGAA ATTATTCCGC TTGCCGCTTT GGTTGGCGTG ATGTTTATCG TGGTGCTCGG CACATTCGAA TGGGCAAGCT TTAAGTTTAT GGGCAAAGTG CCGAAACATG ATGCTTTTGT CATTGTGCTC GTCACCACTG TGACCGTCTT TACCGATCTC GCCTTTGCCG TCTTTGTCGG TGTCGTGGTA TCGGCGCTTG TGTTTGCATG GCAACATGCC AAACACATCA GCGTAAAAGT AACCTCAAAT AGCCTTGGCT GGAAAGTCTA TGAGCTGAAC GGCCCACTCT TTTTTGGCTC AGTGGCCAGC TTCCTCGAAC TCTTCGATGC CTCGCAGGAT CCGCAGGATG TAGTGATCGA TTTTAAGCAT TCTCGCGTAG CCGATCACTC GGCGCTAGAA GCTATAGATA CGCTTGCCGA ACGTTATGTC GCACTAGGGA AAAAGCTGCA TTTAGTGCAT TTAAGTGCCG ATTGTAAAGC CTTACTTCAC AAAGCAGGCG ATTTGGTTGA GGTCAATCTG CTTGACGATC CCCACTATAA AGTTGCGGAC GATAAGCTCG ACTCATAG
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Protein sequence | MINRGFMFDL FRHKTSSHKA DILSGLTVAL ALIPEAVAFA FVANVEPMVG LYAAFIMGLV TALIGGRPGM ISGATGAMAV VMVSLVVEHG VQYLFAAVVL AGLIQISAGV FKLGKFIRIV PYPVMIGFVN GLAIVIFLAQ LGQFKVKNAA GELVWLPQEP LMLTLGLVAL TMAIIYFLPK LTTAVPSSLV AILSVTAIVV GFDLDTRNVL DFLKTMSGDE HATIAGSLPS FAIPQVPFNL ETLYIILPYS FILAAVGLIE SLLTLTVIDE MTNTRGRSNK ECIGQGVGNI TSGFFGAMGG CAMIGQSMIN INSGGRGRLS GITAAIGLLT FILFGASFIE IIPLAALVGV MFIVVLGTFE WASFKFMGKV PKHDAFVIVL VTTVTVFTDL AFAVFVGVVV SALVFAWQHA KHISVKVTSN SLGWKVYELN GPLFFGSVAS FLELFDASQD PQDVVIDFKH SRVADHSALE AIDTLAERYV ALGKKLHLVH LSADCKALLH KAGDLVEVNL LDDPHYKVAD DKLDS
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