Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2374 |
Symbol | |
ID | 4252945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2831732 |
End bp | 2832604 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119006 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_734502 |
Protein GI | 113970709 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000819929 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.351915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGAA AACTGATATT AGTATCAATT TTATGCGTTC CAGCAACTGC AATGGCAGAG TTGCGCCACT ATGTGGCCTC TTTGGGGGAA TCCCAATGGC GAGTTAGTCA AAACAGTCCC ATTGTGTGCC GTCTTGAACA TGATATTCCC TCCTATGGTA AGGCGATTTT TACCAGTGAA GCAGGAAAAC AACTAAATCT AAATTTCACT TTAGATATGT GGGTGAAACC GGACCAAGTC ACCCAAGCTA AGCTGATGAG TAGAGCGCCG AAATGGCGAC CAGGCGTGGT ATCGAAAGAA ATCACTTCTC TACGTTATCA AAAGTATTTT AATGGTGAAG TGCCTAAGCG TGCCGCCTGG TCTATGTTGA CCGAGTTGAG CCGTGGCATG GAGCCGACGT TTTATTATGC CGATTGGTAT GATGAGTCCA ATAAAATTGC CGTAGGACTG TCGGCGGCGA ATTTCGGTCG CAAATATGCT GAGTTTAAGT CGTGTTTATC GCACTTATTG CCCTACAGCT TTGAAGATAT TGCCTTTACC GTACTTAATT ATGATGAAGG CGGAACGGAT TTAACCCGTT TCTCGCAGCA GCAGCTTTCG CGTATTCAAG AATACTTGTC CTACGATCCG GATGTGGAAC TGGTGTTAGT CGATGCTTAT ACCGACAGTT ACGGTGGTCG CTCCGTAAAC CAAAAAGTCT CGGATAAACG CGCCGAGTCG GTCAAAGATT TCTTTGTCGC CAGTGGGATC CCACAGGATA GGATAGTCAC CGTCGGCCAT GGTGAGCGCC GTCATGTGGC GTCCAATGAA GATATTGAGG AGAGGGCACT TAACCGCCGC GTGGTTATCC GGATCAGTAA GCCACTGATG TGA
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Protein sequence | MWRKLILVSI LCVPATAMAE LRHYVASLGE SQWRVSQNSP IVCRLEHDIP SYGKAIFTSE AGKQLNLNFT LDMWVKPDQV TQAKLMSRAP KWRPGVVSKE ITSLRYQKYF NGEVPKRAAW SMLTELSRGM EPTFYYADWY DESNKIAVGL SAANFGRKYA EFKSCLSHLL PYSFEDIAFT VLNYDEGGTD LTRFSQQQLS RIQEYLSYDP DVELVLVDAY TDSYGGRSVN QKVSDKRAES VKDFFVASGI PQDRIVTVGH GERRHVASNE DIEERALNRR VVIRISKPLM
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