Gene Shewmr4_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2374 
Symbol 
ID4252945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2831732 
End bp2832604 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content47% 
IMG OID638119006 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_734502 
Protein GI113970709 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.19929e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.351915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAA AACTGATATT AGTATCAATT TTATGCGTTC CAGCAACTGC AATGGCAGAG 
TTGCGCCACT ATGTGGCCTC TTTGGGGGAA TCCCAATGGC GAGTTAGTCA AAACAGTCCC
ATTGTGTGCC GTCTTGAACA TGATATTCCC TCCTATGGTA AGGCGATTTT TACCAGTGAA
GCAGGAAAAC AACTAAATCT AAATTTCACT TTAGATATGT GGGTGAAACC GGACCAAGTC
ACCCAAGCTA AGCTGATGAG TAGAGCGCCG AAATGGCGAC CAGGCGTGGT ATCGAAAGAA
ATCACTTCTC TACGTTATCA AAAGTATTTT AATGGTGAAG TGCCTAAGCG TGCCGCCTGG
TCTATGTTGA CCGAGTTGAG CCGTGGCATG GAGCCGACGT TTTATTATGC CGATTGGTAT
GATGAGTCCA ATAAAATTGC CGTAGGACTG TCGGCGGCGA ATTTCGGTCG CAAATATGCT
GAGTTTAAGT CGTGTTTATC GCACTTATTG CCCTACAGCT TTGAAGATAT TGCCTTTACC
GTACTTAATT ATGATGAAGG CGGAACGGAT TTAACCCGTT TCTCGCAGCA GCAGCTTTCG
CGTATTCAAG AATACTTGTC CTACGATCCG GATGTGGAAC TGGTGTTAGT CGATGCTTAT
ACCGACAGTT ACGGTGGTCG CTCCGTAAAC CAAAAAGTCT CGGATAAACG CGCCGAGTCG
GTCAAAGATT TCTTTGTCGC CAGTGGGATC CCACAGGATA GGATAGTCAC CGTCGGCCAT
GGTGAGCGCC GTCATGTGGC GTCCAATGAA GATATTGAGG AGAGGGCACT TAACCGCCGC
GTGGTTATCC GGATCAGTAA GCCACTGATG TGA
 
Protein sequence
MWRKLILVSI LCVPATAMAE LRHYVASLGE SQWRVSQNSP IVCRLEHDIP SYGKAIFTSE 
AGKQLNLNFT LDMWVKPDQV TQAKLMSRAP KWRPGVVSKE ITSLRYQKYF NGEVPKRAAW
SMLTELSRGM EPTFYYADWY DESNKIAVGL SAANFGRKYA EFKSCLSHLL PYSFEDIAFT
VLNYDEGGTD LTRFSQQQLS RIQEYLSYDP DVELVLVDAY TDSYGGRSVN QKVSDKRAES
VKDFFVASGI PQDRIVTVGH GERRHVASNE DIEERALNRR VVIRISKPLM