| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2371 |
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| Symbol | |
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| ID | 4252942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2827509 |
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| End bp | 2828195 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638119003 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_734499 |
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| Protein GI | 113970706 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00211275 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.155674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCTG ATATGTCGAT TGTTGGGTTA TTTTTACAAG CCAGTTTATT AGTGAAATTT
GTGATGTTCA CTTTACTTTG CTTGTCTGTA ATGTCTTGGA CGGTGATTTT ACAACGCCGT
AGCTTATTGA CATCTGCAAA AAGTAAATCG GCAAAATTTG AAGATAAATT TTGGTCAGGC
GTTGATTTAA ATCGTCTGTA TAAGGAATTA TCGGCTCGTC CAGATAATAC TGGCTTAGAG
TCATTATTTG TGACGGGTTT TAAAGAATAT TCACGTCTAA ATAAATTAAA TAACAAAGTG
CCCGATGCGG TGATGGATGG GACTTCACGT GCCATGCGCG TCACCTTATC CCGTGAATTA
GAAAAGTTAG AAGCCAACTT ACCTTTATTG GCAACTATTG GTTCGACTAG CCCTTATATC
GGTTTGTTTG GTACGGTATG GGGTATTATG AATTCATTTA TCGCTATCGG CTCAATGGAA
AACGCGACGC TCGCCATGGT GGCGCCAGGT ATTGCAGAAG CACTGATTGC AACCGCAATG
GGTCTGTTTG CGGCCATTCC AGCAGTTATC GCTTATAACC GTTTTGCGAC TCAAGTTGAA
AAGCTGGAAA TCGGTTACGC TAACTTTATG GAAGAGTTTT CTAGCATCCT GCATCGCCAA
GCATACAGTG AGAAGGAAGG CGTATAA
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| Protein sequence | MQADMSIVGL FLQASLLVKF VMFTLLCLSV MSWTVILQRR SLLTSAKSKS AKFEDKFWSG
VDLNRLYKEL SARPDNTGLE SLFVTGFKEY SRLNKLNNKV PDAVMDGTSR AMRVTLSREL
EKLEANLPLL ATIGSTSPYI GLFGTVWGIM NSFIAIGSME NATLAMVAPG IAEALIATAM
GLFAAIPAVI AYNRFATQVE KLEIGYANFM EEFSSILHRQ AYSEKEGV
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