| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2347 |
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| Symbol | |
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| ID | 4252918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2796721 |
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| End bp | 2798190 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118972 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_734475 |
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| Protein GI | 113970682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.300143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000108832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGCGTAATT TGACGTTTTT GACCCGATGT AAACCCCTTG CGGCGAGTGT GCTTTCATTA
ATGTTACTCG GTGGAGCCGC AAAGAGTTTT GCCAACAACG ACTTGCCCGA CTTGGGCACC
GCCGCCGTCA ATACCTTCAG CCTAGAAAAA GAAATGGTCT ATGGCGATGC CTATATGCGC
GTTATTCGCT CATCGGCGCC CATGCTGAAC GATCCGGTAT TGAGCCAATA TTTGACTGAA
CTGGGCAATA AATTAGTCGC CCACGCCACG GGAGTTAAAA CGCCCTTTTA TTTCTTCCTA
CTGCAAAACG ATGAGATTAA CGCCTTTGCC TTCTTCGGCG GCCACGTTGC AGTACACACA
GGGCTATTCC TTAACGCCGA TAACGAAAGT GAACTGGCCT CAGTGCTCGG CCACGAAATT
ACCCACGTGA CCCAACGTCA CTTGGCGCGC TCCCTCGAAG CGCAGCAAAA AAGTGGTCCG
GCGACCGTTG CGGGGCTACT CGGGGCCATT TTATTAACCA TCGCCGTGCC GCAGGCGGGG
ATGGCCGCGC TGGCAACCAC TCAAGCCATG GCGACCCAAT CGAAGATCAA CTATACCCGT
CTGCATGAAA AAGAAGCCGA CCGGATTGGC ATGCAGATTC TGGTCGATGC GGGTTTTGAC
CCCAATGCAG CCGCCGACTT CTTTGGTAAA CTCGCCAGTC GTTACCGTTT TACCACTACG
CCGCCACAAA TGTTGCTGAC TCACCCATTA CCCGAGTCAC GGATCTCCGA AGCGCGCGAT
CGCGCCCACC AGTATCCACA CCGCTATGTG CCGGATAATC TCAACTTCCA GCTCGCTAAA
GCCCGTATCC AGGTGCGTTT TTCCAGTTAC AGCGACGATG CGGTATTGAG CATGTTTGAA
AAGCAGCTCA ATAAGCAAAC CTACGGCTTT AAAGAAGCGG CCCTCTACGG CAAAGCCTTA
GCGCTGTTTA GATTGAAGAA ATTTGACGAG TCCGAAAAGA TTGTCGATGA ACTGTTAAAA
ATCGATGATA ACAACTTGTT TTATATCGAT ACCAAGACGG ATTTGCTCAA CGAGCGCAAG
GATTATGCTA AGGCGACTAA GTTACTCGAA GCGCAACGTA AGATGAAACC CACATCGCAG
GTAATTAACG CGAACTTAGC CAATATCTAT ATTGAGGCCG GTGAGCCAGC GAAGGCTATC
CCGTTGCTAG AAGATATAAT TTTCCTCGAT AAGCAAAATC AACTGCCCTA TCAACTGCTC
AATCTTGCCT ATAAAAAATT GGGCAATCAG GGAATGGAGT ATTTCTCCAA TGCCGAGTTG
ATGGCGCTGG GGGCTAACTA TAAAGGGGCT ATCGATCAAT TGAACTTTGC CTACCGCGCC
TCGGAAGGCA ATCCATTACA ACTGGCACGA ATCGAAGCTC GTATCCGCCA ATTTAAACAA
GCGGATAAAG AGATGGATTC CCTGAAGTAA
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| Protein sequence | MRNLTFLTRC KPLAASVLSL MLLGGAAKSF ANNDLPDLGT AAVNTFSLEK EMVYGDAYMR
VIRSSAPMLN DPVLSQYLTE LGNKLVAHAT GVKTPFYFFL LQNDEINAFA FFGGHVAVHT
GLFLNADNES ELASVLGHEI THVTQRHLAR SLEAQQKSGP ATVAGLLGAI LLTIAVPQAG
MAALATTQAM ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAADFFGK LASRYRFTTT
PPQMLLTHPL PESRISEARD RAHQYPHRYV PDNLNFQLAK ARIQVRFSSY SDDAVLSMFE
KQLNKQTYGF KEAALYGKAL ALFRLKKFDE SEKIVDELLK IDDNNLFYID TKTDLLNERK
DYAKATKLLE AQRKMKPTSQ VINANLANIY IEAGEPAKAI PLLEDIIFLD KQNQLPYQLL
NLAYKKLGNQ GMEYFSNAEL MALGANYKGA IDQLNFAYRA SEGNPLQLAR IEARIRQFKQ
ADKEMDSLK
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