Gene Shewmr4_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2347 
Symbol 
ID4252918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2796721 
End bp2798190 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content50% 
IMG OID638118972 
Productpeptidase M48, Ste24p 
Protein accessionYP_734475 
Protein GI113970682 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.300143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.08832e-09 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCGTAATT TGACGTTTTT GACCCGATGT AAACCCCTTG CGGCGAGTGT GCTTTCATTA 
ATGTTACTCG GTGGAGCCGC AAAGAGTTTT GCCAACAACG ACTTGCCCGA CTTGGGCACC
GCCGCCGTCA ATACCTTCAG CCTAGAAAAA GAAATGGTCT ATGGCGATGC CTATATGCGC
GTTATTCGCT CATCGGCGCC CATGCTGAAC GATCCGGTAT TGAGCCAATA TTTGACTGAA
CTGGGCAATA AATTAGTCGC CCACGCCACG GGAGTTAAAA CGCCCTTTTA TTTCTTCCTA
CTGCAAAACG ATGAGATTAA CGCCTTTGCC TTCTTCGGCG GCCACGTTGC AGTACACACA
GGGCTATTCC TTAACGCCGA TAACGAAAGT GAACTGGCCT CAGTGCTCGG CCACGAAATT
ACCCACGTGA CCCAACGTCA CTTGGCGCGC TCCCTCGAAG CGCAGCAAAA AAGTGGTCCG
GCGACCGTTG CGGGGCTACT CGGGGCCATT TTATTAACCA TCGCCGTGCC GCAGGCGGGG
ATGGCCGCGC TGGCAACCAC TCAAGCCATG GCGACCCAAT CGAAGATCAA CTATACCCGT
CTGCATGAAA AAGAAGCCGA CCGGATTGGC ATGCAGATTC TGGTCGATGC GGGTTTTGAC
CCCAATGCAG CCGCCGACTT CTTTGGTAAA CTCGCCAGTC GTTACCGTTT TACCACTACG
CCGCCACAAA TGTTGCTGAC TCACCCATTA CCCGAGTCAC GGATCTCCGA AGCGCGCGAT
CGCGCCCACC AGTATCCACA CCGCTATGTG CCGGATAATC TCAACTTCCA GCTCGCTAAA
GCCCGTATCC AGGTGCGTTT TTCCAGTTAC AGCGACGATG CGGTATTGAG CATGTTTGAA
AAGCAGCTCA ATAAGCAAAC CTACGGCTTT AAAGAAGCGG CCCTCTACGG CAAAGCCTTA
GCGCTGTTTA GATTGAAGAA ATTTGACGAG TCCGAAAAGA TTGTCGATGA ACTGTTAAAA
ATCGATGATA ACAACTTGTT TTATATCGAT ACCAAGACGG ATTTGCTCAA CGAGCGCAAG
GATTATGCTA AGGCGACTAA GTTACTCGAA GCGCAACGTA AGATGAAACC CACATCGCAG
GTAATTAACG CGAACTTAGC CAATATCTAT ATTGAGGCCG GTGAGCCAGC GAAGGCTATC
CCGTTGCTAG AAGATATAAT TTTCCTCGAT AAGCAAAATC AACTGCCCTA TCAACTGCTC
AATCTTGCCT ATAAAAAATT GGGCAATCAG GGAATGGAGT ATTTCTCCAA TGCCGAGTTG
ATGGCGCTGG GGGCTAACTA TAAAGGGGCT ATCGATCAAT TGAACTTTGC CTACCGCGCC
TCGGAAGGCA ATCCATTACA ACTGGCACGA ATCGAAGCTC GTATCCGCCA ATTTAAACAA
GCGGATAAAG AGATGGATTC CCTGAAGTAA
 
Protein sequence
MRNLTFLTRC KPLAASVLSL MLLGGAAKSF ANNDLPDLGT AAVNTFSLEK EMVYGDAYMR 
VIRSSAPMLN DPVLSQYLTE LGNKLVAHAT GVKTPFYFFL LQNDEINAFA FFGGHVAVHT
GLFLNADNES ELASVLGHEI THVTQRHLAR SLEAQQKSGP ATVAGLLGAI LLTIAVPQAG
MAALATTQAM ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAADFFGK LASRYRFTTT
PPQMLLTHPL PESRISEARD RAHQYPHRYV PDNLNFQLAK ARIQVRFSSY SDDAVLSMFE
KQLNKQTYGF KEAALYGKAL ALFRLKKFDE SEKIVDELLK IDDNNLFYID TKTDLLNERK
DYAKATKLLE AQRKMKPTSQ VINANLANIY IEAGEPAKAI PLLEDIIFLD KQNQLPYQLL
NLAYKKLGNQ GMEYFSNAEL MALGANYKGA IDQLNFAYRA SEGNPLQLAR IEARIRQFKQ
ADKEMDSLK