Gene Shewmr4_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2346 
Symbol 
ID4252917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2796375 
End bp2796608 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content46% 
IMG OID638118971 
ProductSirA family protein 
Protein accessionYP_734474 
Protein GI113970681 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.416048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.87815e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTTTTA TTGATTTAAC ATCATTTCGC TGCCCCGTTC CCTTGGTTAA GGTCAAACTT 
GCGTTGAAGT CTGTGTCTGC TGGCGACAGC TTACATATCC TACTCTCAGA CCCAGGTTCC
CGCCGAGATG TTCCCGCGTT TTTTAAAAAA CAGGGGCATA CCGTCGTGAC ATTGCAAGAT
GACGCCGGCC AATTAGGGCT ATTAATCACA AAAGTTGATT TATCGCAGGG CTAA
 
Protein sequence
MIFIDLTSFR CPVPLVKVKL ALKSVSAGDS LHILLSDPGS RRDVPAFFKK QGHTVVTLQD 
DAGQLGLLIT KVDLSQG