| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2326 |
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| Symbol | |
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| ID | 4252897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2775452 |
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| End bp | 2776399 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638118951 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_734454 |
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| Protein GI | 113970661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.43357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGC TGGATCTTGC GAACTTAAGC GCGACCTCGG TAAGCGCCAG CTCGGATAGG
GTTAGCCTGT TCGAGATGGG GCCACGTGAT GGCTTGCAGA ATGAAGCCGC CGTCCCGACA
CAGGCCAAAG TCGCCTTGAT TGAATCCCTC GCCGATGCGG GCGTGAAGCG AATTGAAGCA
GGCAGCTTTG TGTCACCCAA ATGGGTGCCA CAAATGGCCG ATAGCGGTGA CGTATTGCGC
CAAATTCGCC GTCAAGCGGG CGTGGTTTAC AGCGCCCTCA CCCCCAATGT CAAAGGCTTA
GAGCTGGCGC TGGATGCAAA AGCTTCCGAA GTCGCTATCT TCGGTGCGGC GTCACAAAGC
TTTAGTCAGC GCAATATCAA CTGTTCGATT GAAGAGTCGA TTGAACGCTT TATCCCGTTG
ATGGACATGG CAAAAGCCGC CAACATCCCA GTGCGTGGCT ATGTGTCCTG CGTTTTAGGT
TGCCCCTATG AAGGGGAAAT CGCGGCGAGC GAAGTGGCAA GAGTGTCTGA AATCCTTTAC
AAAATGGGCT GTTACGAAAT TTCGCTCGGC GACACTATCG GTGTAGGCAC GCCGTTAAAA
GCCCGTAAAA TGCTGCAAGC CGTGATGGAG CGAGTCCCGG TTGATAAGCT CGCCCTGCAC
TTCCACGACA CCTATGGCCA AGCATTAGCC AATATTACCG CCTGCCTCGA CTTAGGTGTG
CGCAGCTTTG ATGCCTCAGT GGCGGGCCTA GGTGGTTGTC CGTATGCGAA AGGCGCGTCG
GGCAATCTAG CGAGTGAAGA CTTGGTCTAT ATGCTCCACG GGCTCGGTTT GAAAACGGGT
ATCGATTTAG AAAAACTGGC ATTAGCGGGT TTTGGGATCA GCAAACAATT AAATCGTCTT
AATGGCTCTA AAGTCGCCAA TGCAATCTTG CAGGGCGCTA AAGCCTAG
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| Protein sequence | MSALDLANLS ATSVSASSDR VSLFEMGPRD GLQNEAAVPT QAKVALIESL ADAGVKRIEA
GSFVSPKWVP QMADSGDVLR QIRRQAGVVY SALTPNVKGL ELALDAKASE VAIFGAASQS
FSQRNINCSI EESIERFIPL MDMAKAANIP VRGYVSCVLG CPYEGEIAAS EVARVSEILY
KMGCYEISLG DTIGVGTPLK ARKMLQAVME RVPVDKLALH FHDTYGQALA NITACLDLGV
RSFDASVAGL GGCPYAKGAS GNLASEDLVY MLHGLGLKTG IDLEKLALAG FGISKQLNRL
NGSKVANAIL QGAKA
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