Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2297 |
Symbol | |
ID | 4252868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2739706 |
End bp | 2741445 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118922 |
Product | gamma-glutamyltransferase 1 |
Protein accession | YP_734425 |
Protein GI | 113970632 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0286048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCG CAGGAACTTT TAGACCTCTT ATTCTCGCCA TTGCCATGGC ACTGCCTTTG TTGTCTTCGC CCACTCTCCA TGCCGAAGAA CCTTCGATTT TCAGCCAAAT GGCCACGGCA CAACCCGTAT GGGCAAAACA TGGAATGGTC GCCAGCCAAG AAGCGCTGGC AAGCCGCACT GGCATCGAAA TTTTGAAGCA AGGCGGTAAT GCCGTCGATG CTGCGGTGGC GGTCGCATTC AGTTTAGCCG TCACGCTACC CCGCGCGGGC AATATTGGTG GTGGTGGCTT TATGCTTGTC CATCTGGCTA AAGAAAACAA AACCATCGCC ATCGATTACC GTGAAATGGC GCCATCAAAG GCGAAAAAAG ACATATTCCT CGATGAGAAT GGCGATGCGG TAACTAAATT AAGCCGTGAA CATGGCCTTG CAGTCGGCGT CCCCGGCACT GTGATGGGCA TGAGTTTAGC CCTTGAAAAA TATGGCACGA TGACCATGGC GCAAGTCACG GCGCCCGCCA TCAAAATGGC ACAGGAAGGC ATTAGCGTGA CCCCAGATCT TGCGGTATCC CTTGCAGGCT TAAAGCGCCG CATGAGCCAA TGGCCCAGCA CGGCAACCAT CTTCTATAAG GCCGACGGTA GTGACTACCA AGTGGATGAT ATTTTAAAAC AGCCAGAACT CGCCCACTCC CTGCAACTTA TCGCCGAGAA AGGCACTAAA GGGTTCTACG AAGGTGAAAC TGCGGAGAAA CTGGTTAAGG CCGTGCAAGA TGCTGGCGGC ATCATGACCT TAGCGGATTT AGAACACTAT AAGGCCGTCG AGCGTGAACC GGTTCGCGGT CAGTACCGTG GGTATGACGT GGTTTCTATG CCACCACCAT CCTCGGGCGG CGTGCACATT GTCGAGATGC TCAATGTGTT GCAGCAGTTC CCTATCGATA AGTTCGGTCA CAACACGGCG CAAACCATTC ATGTCATGGC CGAAACCATG AAACATGCCT ACGCCGATCG CAGCGAATAC TTAGGCGATC CCGATTTTTA TAAGGTGCCC GTCAAGCAGT TAACCAATAA GGACTACGCC AAAAAAATCG CCAGCCAAAT TGCGCTAAAT AAAACTACGC CCAGCACCGA AATCAAACCC GGCAATCTAG CGCCCTATGA GAGTGACCAA ACCACCCACT TCTCGGTGGT CGATAAATGG GGCAATGCAG TGTCTAACAC TTACACCTTA AACTTTAGCT ACGGCTCGGG TTTAGTCGCC AAAGGCACGG GCATTTTACT CAATAACGAA ATGGATGATT TTTCCGCAAA ACCCGGCACA CCTAACGGTT ATGGCCTAGT GGGTGGCGAT GCCAACGCGG TGGAAGGTAA TAAACGTCCG TTGAGCTCAA TGAGCCCAAC CATAGTGATG AAAGACGGCA AACCCTTCTT AGTTACGGGC AGCCCAGGCG GTTCACGCAT CATTACCACC ACGCTGCAAA TCATTATGAA TGTAATTGAT CACGGCTTAA ACATTGCCGA AGCCAGCAAT GCCGCGCGGG TACACCACCA ATGGCTACCC GATGAACTGC GAGTCGAAAG CAGCCTGAAC CGCGATACCA TTTCGTTACT CGAAGCTAAA GGCCATAAGG TGAAAGTGCA ATCGGCCATG GGTAGCACTC AATCCATCAT GGTGACAGAC CAAGGGATTT TTGGCGCCTC TGACCCACGC CATTCGGGTA GCGAAGCCGT CGGTTACTAA
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Protein sequence | MRRAGTFRPL ILAIAMALPL LSSPTLHAEE PSIFSQMATA QPVWAKHGMV ASQEALASRT GIEILKQGGN AVDAAVAVAF SLAVTLPRAG NIGGGGFMLV HLAKENKTIA IDYREMAPSK AKKDIFLDEN GDAVTKLSRE HGLAVGVPGT VMGMSLALEK YGTMTMAQVT APAIKMAQEG ISVTPDLAVS LAGLKRRMSQ WPSTATIFYK ADGSDYQVDD ILKQPELAHS LQLIAEKGTK GFYEGETAEK LVKAVQDAGG IMTLADLEHY KAVEREPVRG QYRGYDVVSM PPPSSGGVHI VEMLNVLQQF PIDKFGHNTA QTIHVMAETM KHAYADRSEY LGDPDFYKVP VKQLTNKDYA KKIASQIALN KTTPSTEIKP GNLAPYESDQ TTHFSVVDKW GNAVSNTYTL NFSYGSGLVA KGTGILLNNE MDDFSAKPGT PNGYGLVGGD ANAVEGNKRP LSSMSPTIVM KDGKPFLVTG SPGGSRIITT TLQIIMNVID HGLNIAEASN AARVHHQWLP DELRVESSLN RDTISLLEAK GHKVKVQSAM GSTQSIMVTD QGIFGASDPR HSGSEAVGY
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