| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2289 |
|---|
| Symbol | |
|---|
| ID | 4252860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2730527 |
|---|
| End bp | 2731321 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638118914 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734417 |
|---|
| Protein GI | 113970624 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000396788 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAC GTTGCCATGA AGTGGACTAT GAGATTATCG GTCACAGCAT GCAGTTGGTT
GAGGTCGAAC TCGACCCGCA TGAGACGGTG ATCGCCGAAG CCGGCGCGAT GAATTATCTA
GAGCAAGACA TTAGCTTCGA GGCCAAAATG GGTGATGGCT CCGAGCCTGA ATCTGGCTTT
TTTGGCAAGT TGATGGGGGC GGGTAAACGT GTGCTGACGG GTGAAAGCAT CTTTATGACG
CACTTTACAA ACCTTGGACA TCAGAAACGT AAAGTGGCGT TTGCCGCGCC CTATCCTGGG
ACGATTTTGG CTCTCGATCT TGCCCAATAT GGCGGAGAAC TGATCTGCCA GAAAGACAGC
TTCCTCGCAG CGGCCCTTGG GACGCGAGTG AGCATGAAGT TTAATCGCCG CCTAGGTACG
GGCTTTTTTG GCGGTGAAGG TTTTATTCTT CAAAGCTTAC AGGGTGATGG CATGGCGTTT
ATTCATGCGG GCGGCACCTT AATAAAGAAA GAACTCAAAG GCGAAACCTT ACGTGTCGAT
ACAGGTTGTT TGGTCGGTTT TACCCCTGGG ATTGATTACG ATATCGAGCG GGCTGGCTCG
TTAAAATCGA TGGTATTTGG TGGAGAAGGG CTGTTTTTAG CGACCTTAAA AGGCCATGGC
ACTGTGTGGT TGCAGAGTCT ACCATTCTCG CGGATGGCGG ATCGCATTAT CGCTCACGCT
CCCTCTGCTG GTGGAAGTGA CCGCGGTGAA GGTTCAGTCC TCGGCGGGCT TGGCCGCATG
CTCGACGGGC GTTAA
|
|---|
| Protein sequence | MSRRCHEVDY EIIGHSMQLV EVELDPHETV IAEAGAMNYL EQDISFEAKM GDGSEPESGF
FGKLMGAGKR VLTGESIFMT HFTNLGHQKR KVAFAAPYPG TILALDLAQY GGELICQKDS
FLAAALGTRV SMKFNRRLGT GFFGGEGFIL QSLQGDGMAF IHAGGTLIKK ELKGETLRVD
TGCLVGFTPG IDYDIERAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA
PSAGGSDRGE GSVLGGLGRM LDGR
|
|---|
| |