| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2285 |
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| Symbol | |
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| ID | 4252856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2727063 |
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| End bp | 2728775 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118910 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_734413 |
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| Protein GI | 113970620 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0389499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT CAACGACTCA AGCAACAAAC CCACTTAAAT ACAGTGAGTT CCGGGGACCT
AATTCCCCGG AGCTTGTTGA AAAAACCATA GGACAGTACC TTAACGATAT CGCTAACACT
TATCCCGAAC AGTTAGCCGT TGTCGTGAAT CATCAAGATA TCCGTTGGAA TTACCGCCAA
TACCTTGCAC AAATCGATGC CTTGGCCACA GGCTTACTCA AACTGGGCAT AGGTCCAGGG
GATCGCGTGG GCATTTGGTC GCCCAATAAT ATTGAGTGGT GCTTAACCCA ATTCGCCACC
GCCAAAATTG GCGCCATCAT GGTGTGCATC AACCCCGCTT ATCGCCCTGA AGAATTACAA
TATGCCCTGA CTAACGTGGG CTGTAGGGCG GTGATTTGCG CCGATAAATT CAAGTCCAGT
AACTATTTAC AGATGCTCTA CGAGTTAGCG CCAGAGCTTA AGGTGTGCGC CGCAGGGCAA
TTACAGGCCA AAGCGTTGCC CGAGTTACAA TTTGTGATCC GCATGGGGGC GGAGCAGTCT
CCCGGTATGT TGAACTTTGA TGATTTATTG CTTGAAGTGA CGCCAGATGA CAAGGCGGCG
CTCGAGCAAA TCGCCGAGTC ACTTAGCCCT TATGACGCCA TTAATATTCA ATTTACCTCT
GGCACCACGG GCAGCCCAAA GGGGGCGACC TTATCGCACC ACAACATCCT GAATAATGGC
TACTTAGTGG CCGAGGCAAT GAAGTTTACC TGTGAAGATA AGCTCTGCAT TCCTGTGCCT
TTATACCATT GTTTTGGCAT GGTGTTGGGT AACCTTGTGT GCCTCGCTAA GGGCGCGGCG
GCGGTCTTTC CTGGGGATTC CTTCGATCCG CTGACCACCC TAGAGGTGGT TGAGCGTGAA
CGCTGCACCG CACTACACGG TGTTCCCACT ATGTTTATTG CCGAGTTAGA GCACCCCGAA
TTTAAACGCT TTGACTTAAG CTCGCTGCGT ACCGGTGTTA TGGCGGGAGC GACTTGCCCA
GAAGAAGTGA TGCGCCGGGT ACAAAACCTG ATGTATATGC AGGAAGTGTT AATTGGGTAT
GGGCAAACCG AGTGCAGCCC GCTGAACCAC ATTACTGAAA TCGACTCACC AGTTGAGAAA
CGTGTGCTTA CCGTTGGCCG TGCTTTACCC CATACCGAAG TGAAAATCGT CGATGAATTT
GGTGAAGTGC TGCCAATCAA TACGCCCGGT GAAGTCTGTA GCCGTGGCTA TTGCATCATG
CAGTGTTACT GGAATGATCC CGAAAAAACG GCGGCAACTA TCGACAGTGA AGGCTGGCTA
CATTCTGGCG ATATTGGGCA AATGGATGAG CAAGGTTATG TGCAAATCGT TGGCCGTATT
AAAGATATGA TTATTCGCGG TGGCGAGAAT ATCTATCCCC GTGAAATTGA AGAGAAACTC
TATACTCATA AAGATGTGCA AGATGCAGCA GTGTTTGGGG TTCATAGTGA TAAATACGGC
GAAGAAGTGT GCGCGTGGAT CAAGATTCGC AGTGGCGCCA CGATTTCAGA GGAGGATATT
CGTCATTTCC TCACCGAAAA GTTCGCCTAT TTTAAAGTAC CTCGCTACAT CAAGTTTGTG
GAGCAATACC CCATGACTGT CACGGGCAAA ATCCAGAAAT TTAAAATGCG TGAGCTGATG
TATCAAGAGC TATATGAGGA TATTAATGCC TAG
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| Protein sequence | MSVSTTQATN PLKYSEFRGP NSPELVEKTI GQYLNDIANT YPEQLAVVVN HQDIRWNYRQ
YLAQIDALAT GLLKLGIGPG DRVGIWSPNN IEWCLTQFAT AKIGAIMVCI NPAYRPEELQ
YALTNVGCRA VICADKFKSS NYLQMLYELA PELKVCAAGQ LQAKALPELQ FVIRMGAEQS
PGMLNFDDLL LEVTPDDKAA LEQIAESLSP YDAINIQFTS GTTGSPKGAT LSHHNILNNG
YLVAEAMKFT CEDKLCIPVP LYHCFGMVLG NLVCLAKGAA AVFPGDSFDP LTTLEVVERE
RCTALHGVPT MFIAELEHPE FKRFDLSSLR TGVMAGATCP EEVMRRVQNL MYMQEVLIGY
GQTECSPLNH ITEIDSPVEK RVLTVGRALP HTEVKIVDEF GEVLPINTPG EVCSRGYCIM
QCYWNDPEKT AATIDSEGWL HSGDIGQMDE QGYVQIVGRI KDMIIRGGEN IYPREIEEKL
YTHKDVQDAA VFGVHSDKYG EEVCAWIKIR SGATISEEDI RHFLTEKFAY FKVPRYIKFV
EQYPMTVTGK IQKFKMRELM YQELYEDINA
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