Gene Shewmr4_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2274 
Symbol 
ID4252845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2718753 
End bp2719304 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID638118899 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_734402 
Protein GI113970609 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC CTCTTTTTCC TTTGCCAATC TGTTTATTAC CAGAGGGATA TACTCAGTTG 
CGCATTTTTG AACCTAGGTA TAAACGCTTA GTCGCTGAAT CCCTAAAATC AGGCGACGGC
TTTGGGTTGT GCATGACATC GGAAGATGGC AAAACCATTT ATCCCATCGG CACACTCGTG
CATATCATCG ATTTTGAAAC CTTACCCGAT GGTATGCTCG GAATTAGCAT TCAAGGAAAC
CAACGCTTCA CCCTCGGCGA TATTGCAGTC GAGCCAGATG GTTTAAAGCG CGCCGAAGTT
AACTTTATCG ATAATTGGCC GCCATCGCCT ATCCAAGAAA ATGAACGTTA CTTGAGCAAA
ATGCTACAAA ACATTCTCAA GGAGTACCCG CAGCACCTTC AACATTATCA AGTAGAACAA
TTTGAGGATA TCGCCTGGGT TTGCCAACGC TGGTTAGAAA TTCTGCCCGT GCAAGCATCA
GAGAAATACA CTTGTATCAA TGCCTTAGAT CATCAACTGA CACTGGACTT ATTACGCACT
GTGATTAAGT AA
 
Protein sequence
MKLPLFPLPI CLLPEGYTQL RIFEPRYKRL VAESLKSGDG FGLCMTSEDG KTIYPIGTLV 
HIIDFETLPD GMLGISIQGN QRFTLGDIAV EPDGLKRAEV NFIDNWPPSP IQENERYLSK
MLQNILKEYP QHLQHYQVEQ FEDIAWVCQR WLEILPVQAS EKYTCINALD HQLTLDLLRT
VIK