| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2254 |
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| Symbol | |
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| ID | 4252825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2695591 |
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| End bp | 2698806 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118879 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_734382 |
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| Protein GI | 113970589 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000102262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.239994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATATC AGGTGTTAGC CAGAAAATGG CGCCCTGCCA CATTCGAACA GATGGTCGGC
CAAAGCCACG TGTTGCACGC GCTCACGAAT GCGTTAACGC AACAACGTTT ACACCATGCT
TATCTTTTTA CGGGTACACG CGGTGTGGGC AAGACCAGTT TGGCGCGCCT CTTCGCCAAA
GGCCTCAACT GTGAAAAGGG CGTAACGGCA TCCCCCTGTG GTGTGTGTGG CAGCTGTGTC
GAAATTGCCC AAGGCCGCTT TGTTGACTTG ATCGAAGTCG ATGCCGCCTC GCGTACTAAA
GTCGATGACA CCCGTGAACT CTTAGATAAT GTGCAATATC GTCCGACCCG TGGCCGTTTT
AAGGTCTACC TGATTGACGA AGTGCACATG CTCTCCCGCA GCAGTTTTAA TGCGCTGCTA
AAAACCCTCG AAGAACCGCC AGAGCATGTG AAATTTTTAC TGGCGACGAC CGATCCGCAA
AAGCTGCCGG TGACTGTGTT ATCCCGCTGT CTGCAATTTA ATTTAAAGAG CTTAACCCAG
CAGGAAATTG GCACTCAGCT ACAGCATATT TTAACCCAAG AGCAATTGCC CTTTGAGCAC
GAAGCCTTAA CTCTGCTCGC CAAAGCGGCC AATGGCAGTA TGCGTGATGC CTTAAGTTTG
ACCGATCAGG CCATTGCCTT TGGTGGTGGC ACGGTAATGC TCAATCAAGT GCAATCTATG
CTGGGCAGCA TCGATGAGCA GCATGTGCTG CGCTTACTCA AAGCCTTAAC CGATGCCGAT
ATTGGCGTCT TGATGCAAAG CTGCGCACAG GTGCTCGCCT ATGGCGCGGA CGCCCAAGAA
GTGCTGCGCA GTTTACTGGA ATTATTGCAT CAAATTACCC TGACTCAATT TGCACCTGCT
GCGGCGCAGC AATCCCTTTA TAGCGCACAA ATTCAAGCCT TTGCCGAGCA GTTAGCGCCT
GAACAAGTGC AGTTGTATTA CCAGATTTTA CTGACTGGCC GTAAAGACTT ACCCCATGCG
CCGGATCCTA AATCGGGCCT CGAAATGGCG TTACTGCGTG CGGTGGCATT TGTTCCCGAA
AAGCCAGTAA AACGTTGGCA GGTTGAAGAT GCTGCTAAGG TGAGCTTGCC AGCTCAGCAG
CCTTCGACCA TACCTGCTGC GACAGAGCAG GCAGTGAATA GGGTGGAAAA TCAGGCAGAG
GCTGAAAAAA AAACTCCGTT AACTTCCACC GTTGACTCAC AACCCGCGGC AACGGAAGCG
GTTCAGTCTG GGTTTATGTC AGAACCAAGT GTTGCAGACC CCACGCTTCC TCAGCCCGAG
ATCTCTAAGG CTTCTCAAGC TTCACAAGCG TTAGTAGCCG AAGCCGCGCA GCAGCTTTTA
TCCGATGAAG ATGTATCAGC AGTCGATGGA GATGATACAG CTGGTGAAGA GTCAGCACTC
AACGCGGCAT TGATTGCCGA GCAGCAAGTG ATCTTAAGCC AAGCCCAAAG CCAAGGTTTT
GGCGCAAGTA CCGAGGTGGT ATCGAGTACT GAAGCCGTCT TAATTTCAGA ATCAAGCCCT
AATTCAAAAA CTGACGCAAG CTCTGAATCA AGCCCTGAAC CGAGCTCTGT TTCTACGCCT
GTATCGAATC TTGATGCTGA GCATAATCAA GCTGCAATGA TGGATTCCGC TAGTATTGCT
CAGAAGCCTT CTGCTGCGGC ATTAACAGCA ACTGTTGCCT TATCTTATGA TGATGCCGAG
GAAAATATTC AAGCGGGTGC TAATCAGAGT ACAGATGCGC TAGCGTCAGA TGAATATTCT
GCAGAGGATT ACGGACAATA CGATTATGCC GCCGCGCCGC TCGATGCCTA TCAGGATGAT
TATTCGCAAT TTATGGTTGA GGAGCAGGGC AGATTCTCTG GCATGGAAGA TAGCTCGTTG
ATGAGCGACA GTATTCAGTC TATCGACCAT AGTGATGTTG TGCATGAGCC CGCTGCTGCG
GCCCCCAAAT CGCAGTCTTT TGCCGACAAT TCAGTTTCAA CAACTCCTCC GGTTTCAACA
GCTACTGTGT CCCTCGAGGA TGACGATATT TTATCGGCGG TATTAGCGGC GCGAGACTCC
TTGTTATCCG ATCTTGATGC GCTTAGCACC AAGGAAGGTG ATGGAAAAAA GCTGGCAACG
GAAGTTAAGG TTAAAACCCC GAGCCAGAAC GTGCATACTG CGCCAGCAAC TAAAGCGTCT
GCCAGTACAC CTTCAGAGAC GAAAACCGCC AGTGGTGAGG CCGAGAATGA TTTTGAGCTG
CCCTTTGACG ATGATTTTGA GATCGAGAGC CTTTTTGAAG CTCAGGCAGG AGTAATAAAC
GCTTCACTAC CCGCTCATGT TGCGCCTGCG CCACATCCGC AGTTCGATCC CAATGATCGT
CCGCCATGGG AGGAGGCGCC AGTGGATACT CTAGCCGATG TCGAACCCGT AGCAACTTCT
TATCAAGGGA GTGAAACCGC GCGCGCGCCG CAAGTCAGCC AGACACCACA GCCAATTATC
GCGCCTCAAG AGCCTGAATT GGCGACTGGA ATTGCGCATT CTGCCTCAAT TCCTACTCTG
CCTACTGATA CCGGGGCGGC TAATACCAAG ACGGCTAATA GTGAAGAGAC TCGGGTTGAG
CAAGCGATAG CGCCTCATCC ACAAAGAGAT ACGGCGGCGC AGCCCGTGAC TCAAACCCAG
ACCCCGCCAC AGTCAAGCGA GGAGACGCAA CAATCTGCAC CATCCACAGC ATTAACCTTG
GCGCAATCGA TTACCGGTCA TCCTTTAGAC TTGCACTGGT ATAAGCTCAT GGCGAGCCTA
GAGATTGGCG GCCGTGTGCG ACAGTTGGCG GTAAACTCGA TTTGTCAGCT GCAGGCTAAC
CCTTTGCCTT TGTTGCTAAA ACCTGATCAA AAACACTTGT CGGCGCCAGT AGCAATTGAG
CAGCTGGAGC AAGCATTGAC GGCCGCATTG GGGAACCCAA GGCAAGTCGA GGTGGTCATA
GGAATCGATC CCACACGGGA AACGCCCTTA GAGCTACGTA AGCGGTTCCA TCAAGAGTTG
CTGCAACAGG CGCGTCAATC CCTGATGATG GACGATAATG TACAGTGGCT GATTAACCGA
TTTGGGGCCG AGCTTGATCA GGACACTTTG GTTTATCCGC CAGAATTGTT AGCTCAGCGT
AGTGGGCTCA TTCCCGCACT GCCTGAGCCA GAGTGA
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| Protein sequence | MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFTGTRGVG KTSLARLFAK
GLNCEKGVTA SPCGVCGSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPTRGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLTQ
QEIGTQLQHI LTQEQLPFEH EALTLLAKAA NGSMRDALSL TDQAIAFGGG TVMLNQVQSM
LGSIDEQHVL RLLKALTDAD IGVLMQSCAQ VLAYGADAQE VLRSLLELLH QITLTQFAPA
AAQQSLYSAQ IQAFAEQLAP EQVQLYYQIL LTGRKDLPHA PDPKSGLEMA LLRAVAFVPE
KPVKRWQVED AAKVSLPAQQ PSTIPAATEQ AVNRVENQAE AEKKTPLTST VDSQPAATEA
VQSGFMSEPS VADPTLPQPE ISKASQASQA LVAEAAQQLL SDEDVSAVDG DDTAGEESAL
NAALIAEQQV ILSQAQSQGF GASTEVVSST EAVLISESSP NSKTDASSES SPEPSSVSTP
VSNLDAEHNQ AAMMDSASIA QKPSAAALTA TVALSYDDAE ENIQAGANQS TDALASDEYS
AEDYGQYDYA AAPLDAYQDD YSQFMVEEQG RFSGMEDSSL MSDSIQSIDH SDVVHEPAAA
APKSQSFADN SVSTTPPVST ATVSLEDDDI LSAVLAARDS LLSDLDALST KEGDGKKLAT
EVKVKTPSQN VHTAPATKAS ASTPSETKTA SGEAENDFEL PFDDDFEIES LFEAQAGVIN
ASLPAHVAPA PHPQFDPNDR PPWEEAPVDT LADVEPVATS YQGSETARAP QVSQTPQPII
APQEPELATG IAHSASIPTL PTDTGAANTK TANSEETRVE QAIAPHPQRD TAAQPVTQTQ
TPPQSSEETQ QSAPSTALTL AQSITGHPLD LHWYKLMASL EIGGRVRQLA VNSICQLQAN
PLPLLLKPDQ KHLSAPVAIE QLEQALTAAL GNPRQVEVVI GIDPTRETPL ELRKRFHQEL
LQQARQSLMM DDNVQWLINR FGAELDQDTL VYPPELLAQR SGLIPALPEP E
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