| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2253 |
|---|
| Symbol | |
|---|
| ID | 4252824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2695091 |
|---|
| End bp | 2695426 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638118878 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734381 |
|---|
| Protein GI | 113970588 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000393048 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.185455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGT TTGGAAAAGG CGGTATGGGC AATCTGATGA AACAAGCCCA GATGATGCAA
GAAAGAATGG CAAAAATGCA GGAAGAAATT GCCCGCATGG AAATGGTCGG TGAGTCAGGT
GCGGGTCTGG TTAAAGTGAC CATGACTGGC GCACACACAG TACGTAAAGT CGAAATCGAT
CCAAGCTTAA TGGAAGACGA TAAAGAAATG CTGGAAGATT TGATCGCGGC AGCCTGTAAC
GATGCTGCAC GTCGTATCGA AGAGAATCAA AAAGCTAAAA TGGCCGAAGT GACTGGCGGT
ATGCAATTAC CACCAGGCAT GAAAATGCCA TTTTAA
|
|---|
| Protein sequence | MTMFGKGGMG NLMKQAQMMQ ERMAKMQEEI ARMEMVGESG AGLVKVTMTG AHTVRKVEID
PSLMEDDKEM LEDLIAAACN DAARRIEENQ KAKMAEVTGG MQLPPGMKMP F
|
|---|
| |