| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2199 |
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| Symbol | |
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| ID | 4252772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2627202 |
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| End bp | 2627891 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118825 |
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| Product | sortase family protein |
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| Protein accession | YP_734329 |
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| Protein GI | 113970536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA GTATGCGCAT GACTCAACAG ATACAAATAG GGGTGCTGGT GGGATTGGTA
TTACTTGGCA TTACGTTGTT TGGAAAAGGA TTCTATATGC AAGCGAAAGC ACACTTTGCC
CAATATTTGA TTGAACAAGC CTGGGCGAAA ACCTTAATCG ATGGTCAATC CCATAAACCT
TGGTCCTGGG CCGATACCTA TCCCGTGGCT AAGCTCTCCA TCGAGCAGGC CAAAAGACCG
AATCACTTCG ATGGTCCGGC ATCCAACGAC AGCTTATATG TGCTGGCGGG CGCATCTGGT
CGTAATTTGG CCTTTGGGCC TGCCTTAGTG CTATCGAGTG CGCCCGCTGG CGCGCAAGGC
AACACAGTGA TTGCTGGGCA CAGGGATACG CATTTTGCGA TGTTAAATGG TATCAGTGTT
GGACGCCGCT TGGCGCTGCA AACCGCGACG GGTAAGGAAA TTGTTTACCA AGTGGTGGCG
ACCGAAGTGG TGCACGAATC GCAAACTGAG TTGATGGCGC CAAGTGAGGA TAATCGTTTA
ACGCTAATCA CTTGTTACCC CTTTGATGCG CTGCAAGGCG GGGCCGAACT GCGTTTTGTG
GTGCAGGCTA TTCCTGTCCT GCCAGAGAAT GCTGCCGCGC AATCCGTAGA AACGACGGTC
AATACGACTG CGGCACAAAA AGTGGCTTAG
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| Protein sequence | MSMSMRMTQQ IQIGVLVGLV LLGITLFGKG FYMQAKAHFA QYLIEQAWAK TLIDGQSHKP
WSWADTYPVA KLSIEQAKRP NHFDGPASND SLYVLAGASG RNLAFGPALV LSSAPAGAQG
NTVIAGHRDT HFAMLNGISV GRRLALQTAT GKEIVYQVVA TEVVHESQTE LMAPSEDNRL
TLITCYPFDA LQGGAELRFV VQAIPVLPEN AAAQSVETTV NTTAAQKVA
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