Gene Shewmr4_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2190 
Symbol 
ID4252763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2617776 
End bp2618798 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID638118816 
Producthypothetical protein 
Protein accessionYP_734320 
Protein GI113970527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGACA GTCAACATGG ATTAACCCTT TGGAAGCAGC GTGTGCTGCA AGCCTTGACT 
GTGCCTAAAT GGCTTAAACA TCCATTCGTG ACACTTAAGC AATTTTGGTT GAGCTTAAAT
GTCGCTCAGC GTTGTTACCT ATTAGCACTA CTGGCGTTAA TGGTATTTCA ACCCGAAATT
TGGATTGCCG CGATGATCAC CGCTATCGCC TTGATTATTG AGTTTTGGCC CAAATTTGCC
ATGGCTTGGC ATACGCTGGC GGGCAAAGCC ATTTTCCTAT TGTTTTATGC GGTCATCGCT
AACTTTGCCC TAGCCGCCAG CGGCAGTGTG GTGAACGAAA TCACTGGTGT TTCGGCGTCA
CATCTATCCT ATACCCATAA CTTTGCGATT CTGCTGTACC TGCCGATTTG GTTTGTGTGT
ATCTCCATCC TCGCCTTACT CCTACTGCAA TTGGTGATCC CTTGTTATTT ATTCTTCCAT
ATCGGATTAA GGATCTTAGG ACTCGAAGCC AAGCAGCAAG GCAGTAAAAA ACGATTTGTG
GTGACAACCG CGTTGGTGCG TATGATCCTG TCTGTAGTGC TGTTATTAAA CTTAATTGCG
ATTACCGATG GCGAAAACTG GGTAGGGGAT TTAGCCAAGA CTACCCAAGG GATAAAAGGC
GATATGCTTG AAGTTAAAGT TGTGGATGAA GGCGAAACCA TTCTCAAAGC CGAGGACAGT
ATTGAACAAG CGGGAACTGA ACTCACACAG CAACCCAATC AAACCGACAC CACCGAAACA
CTCAAAGCCT TTGGTCATAG TTACTACAAA GGGATCCGTG ATTTAATTGC CTTATTTGCC
TATAAATTTG AAGCCGATGG TCGCAGTCGG TGTGATAAAT TAGCCGACTC AGTGGTGATT
GAGCTAAATG ACTATGAAAT ATTGGAAATC ACCGAGTCTG CCCATGAGCA GTATGGTTAC
CATTTTGAAG TCAAAAAATG TATTTCTCCC GCCTTTGGTC AGGTGGCATC AACACCTAAG
TAG
 
Protein sequence
MVDSQHGLTL WKQRVLQALT VPKWLKHPFV TLKQFWLSLN VAQRCYLLAL LALMVFQPEI 
WIAAMITAIA LIIEFWPKFA MAWHTLAGKA IFLLFYAVIA NFALAASGSV VNEITGVSAS
HLSYTHNFAI LLYLPIWFVC ISILALLLLQ LVIPCYLFFH IGLRILGLEA KQQGSKKRFV
VTTALVRMIL SVVLLLNLIA ITDGENWVGD LAKTTQGIKG DMLEVKVVDE GETILKAEDS
IEQAGTELTQ QPNQTDTTET LKAFGHSYYK GIRDLIALFA YKFEADGRSR CDKLADSVVI
ELNDYEILEI TESAHEQYGY HFEVKKCISP AFGQVASTPK