Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2189 |
Symbol | |
ID | 4252762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2617240 |
End bp | 2617755 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118815 |
Product | protein tyrosine phosphatase |
Protein accession | YP_734319 |
Protein GI | 113970526 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.810234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTAGAAG ATAAAGCGTT AGCAAAAGAG CAGCATGTAC GACGCATCTT AATGGTCTGT ATGGGCAATA TTTGTCGTTC GCCCACCGCC GAGGCCGTTT GCCGAGCTAA AATTCGCGAG CGCCGTCTTA ATATCGACGT CGATTCGGCG GGCACTATTG GTTATCACCA AGGGGATCAA CCCGATAGCC GTTCAATGGC GGCAGGAAAA AAACGCGGAT TGAGTTTCGA CGGCATGCGA GCAAGACAAG TGGTTGATGC CGATTTTGAG CATTTCGATC TTATTTTAGC GGCAGATAAT AGTAACCTCG GTGATTTACG CCGCCGTTGC CCACCCGAAT ATCAATACAA ATTAAAGCTG ATGTTGTCTT TTGGTGATTG CGACACGGAT GAAGTCCCCG ATCCCTATTA CGGCGGTGCG CAAGGATTCG AATTAGTCCT CGATTTACTC GAACAGAGTA TTGACGCTTT ATTAGCGCAG TTAGCCGGAA AAACGGATGG GAAGAATAAC GATTAA
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Protein sequence | MLEDKALAKE QHVRRILMVC MGNICRSPTA EAVCRAKIRE RRLNIDVDSA GTIGYHQGDQ PDSRSMAAGK KRGLSFDGMR ARQVVDADFE HFDLILAADN SNLGDLRRRC PPEYQYKLKL MLSFGDCDTD EVPDPYYGGA QGFELVLDLL EQSIDALLAQ LAGKTDGKNN D
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