Gene Shewmr4_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2172 
Symbol 
ID4252745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2601269 
End bp2601547 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content43% 
IMG OID638118798 
Producthypothetical protein 
Protein accessionYP_734302 
Protein GI113970509 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000119171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATGTG CGGTTTATAA AAGTAGTCGA AAGGCTGACA CTTATTTATT TGTGAACAAA 
AGGGACTGTT TTGATGACGT CCCCCAAGCG CTGTTGGATA TGTTTGGTGT GCCTCAGTTA
GTGATGGTGT TCCCCATAGC TAAGCGTGAA TCCCTCGGTA TTGCCGATAT TCAAAAGGTC
AGAGCAGCAC TCGAGGAAAA GGGTTTTTAT TTACAAATTC CGCCACCGCA GGTTAATTTA
TTGGCCGAAC ACAGAGTAAG TCTTGGGATT AAAGACTAG
 
Protein sequence
MLCAVYKSSR KADTYLFVNK RDCFDDVPQA LLDMFGVPQL VMVFPIAKRE SLGIADIQKV 
RAALEEKGFY LQIPPPQVNL LAEHRVSLGI KD