| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2164 |
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| Symbol | |
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| ID | 4252737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2592302 |
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| End bp | 2594122 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118790 |
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| Product | AsmA family protein |
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| Protein accession | YP_734294 |
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| Protein GI | 113970501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0565997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.411123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA TTAAGTGGCT TATAGCTCTT CTAGTGACCT TAGTCGTTGC TGTCACCGTA
TATCTCACCG TATTTTTTGA CCCTAATGAT TTTAAACCGG AAATAGTCAA CGCCGTTAAA
AAACAAACTG GGCGTGAATT TGTCATTGCT GATGACTTGT CGTGGACGTT TTTTCCCACG
GTAGGGATTA ATTTAGGGGG TGTTTCTCTC TCTAACCCTG AGGGATTTAC CCCAAAATCT
ATGTTAGAAG TGAATAAAGC GGTGGCCGAA GTCGAGCTTA TGCCACTCTT TAGTAAACAA
ATTGAAATTG CTCAGCTCAG TCTCGATGGT GCAAAAATCA ATCTGGTTAC TCGTAAAAAT
GGTAGCTCGA GCCTCGATGG TTTAACGGGC AATGCCGCTG AAAAACCAGC AACGCCTGCC
GAGCCAAGCG CCAAAGCGCA ATTAACCAGC ATTGATGTGG GCGGCGTTTC GATTACCAAT
ACCGAAATCA ATTTAATTGA TGAAGCCAAG GGACAAACCC AAACCTTAAC CTTAAAGCAA
TTTACGCTGG GGGCATTTTC ACTCGATAAA TTTGCACCTA TTAGCTACGA ATTTGCCGCG
ACCATGCCGG ACATGACAGT GAGCAGTAAG GGCGAAGGGC AAATCAAATT AAGCCATGAT
TTTAATCAAC TGGTGATCGA GAAGCTGGAT ATTGAAACTC AGGTTGAAGG TGAAGGTATC
CCCAATAAAA AATTGACTGC CGAGGTCAGT GTAAACAGCC AAATCGCATT AGATAAAAAG
CAATTGTCTG CGCACATCAG CAAGTTAACT GCGATGGATA TCAATGCAAC GGGCAAGTTG
GCGGTCAATT ATGGCGGAAA AGTACCGCAA ATTAGCGCGG ATTTCCAACT CGGCGATATT
GATCTCGATG CCTTGTTGCC TAAATCTGAT ACGGCGGAAA AACAAACCGC AGCAACGCCT
ACACAAACCC AGGCGGCTGA ACCAGATCTC ACCGCGCTCA ATGGCTTGGA TGCCAAACTC
ACCTTAGCGG TAAAATCCAT TAAGGTGGCG AACCTATCAA CGCAAAACTG GTTGATGGAT
TTGGGCATTA AGAATGGTGT GGTCGACCTT AAGCAACTGA CTGCGGATCT TTACCAAGGT
AAGTTGATGC TGAATGCACA GGTCGATGCC CGTTCAAAAG TCGCGAGTTA TCAATTTGAT
AAGCAAATCT CGGGTGTTCA AATTCGTCCA TTACTCAAGG ATGCCGCCGA GCTGGAAATC
CTGGCAGGTA CGGCGAATTT TAACGTCAAA GGCAAAGGTA AGAGTTTAAT TCCAGAGCAG
TTGAAGAAAA ACCTACTTGC TAATGGCCGT TTTGATATTA CCGACGGTGC CCTTTACGGG
GTGAATATTC CGCAAATGAT CCGTAGCGCT CAGGCCAAGT TAAAGGGTGA TATGTCCGCC
GACACGAAAG AGGAGCGTAA AACCGACTTT TCGAGCCTGA CGGGTAACTT CACCCTTGAG
AATGGTGTGG CGACAAATCC TGATCTTGCC ATGTCATCAC CACTATTACG GGTGGCGGGT
AAGGGCAGTG CAAACCTGCT GACCGAAGGC TTGGATTATC GATTGACCAC GACCTTAGTC
AACTCCCTTA AAGGTCAAGG CGGCAACGAA AAAGATGCAT TGGCTGGCAT TGATATTCCA
CTTGCGATCA CCGGCACCTT CCAAAAGCCT GAATATGCCT TAGATACCCA AGCGCTACTG
AATAATCAGT TGAAGGAAGA AACGGATAAA GCCAAGGATA AGTTAAAGGA TTCCTTACTG
AAAAAACTCG GTGGTTTTTA G
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| Protein sequence | MKFIKWLIAL LVTLVVAVTV YLTVFFDPND FKPEIVNAVK KQTGREFVIA DDLSWTFFPT
VGINLGGVSL SNPEGFTPKS MLEVNKAVAE VELMPLFSKQ IEIAQLSLDG AKINLVTRKN
GSSSLDGLTG NAAEKPATPA EPSAKAQLTS IDVGGVSITN TEINLIDEAK GQTQTLTLKQ
FTLGAFSLDK FAPISYEFAA TMPDMTVSSK GEGQIKLSHD FNQLVIEKLD IETQVEGEGI
PNKKLTAEVS VNSQIALDKK QLSAHISKLT AMDINATGKL AVNYGGKVPQ ISADFQLGDI
DLDALLPKSD TAEKQTAATP TQTQAAEPDL TALNGLDAKL TLAVKSIKVA NLSTQNWLMD
LGIKNGVVDL KQLTADLYQG KLMLNAQVDA RSKVASYQFD KQISGVQIRP LLKDAAELEI
LAGTANFNVK GKGKSLIPEQ LKKNLLANGR FDITDGALYG VNIPQMIRSA QAKLKGDMSA
DTKEERKTDF SSLTGNFTLE NGVATNPDLA MSSPLLRVAG KGSANLLTEG LDYRLTTTLV
NSLKGQGGNE KDALAGIDIP LAITGTFQKP EYALDTQALL NNQLKEETDK AKDKLKDSLL
KKLGGF
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