| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2159 |
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| Symbol | |
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| ID | 4252732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2586967 |
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| End bp | 2587881 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118785 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734289 |
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| Protein GI | 113970496 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000106739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0959224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAA CCTTAAGGCA ACTTGCGGTA TTTGAAGCTG TTGCACGCAG TGGGCAAGTA
GCCAAAGCGG CGGAGCAGGT TAATCTCTCG CCGCCAGCGA CCTCAATGGC CTTGGCCGAA
TTAGAAAAGC AGCTTAACGC CCGTTTATTT GAACGGATTG GTAATAGGTT GCAGCTCAAC
TCCCAGGGTA ATCTGTTACT GCCACTGGCG ACGGACTTGT TGCATCGAGT CGAGCAAATC
GAGCAGGCGT TCACCCGCCA AGACGGCGAT TTGGTCGGGC ATTTAAGCGT GAGTGCCAGT
TCGACTATCG GCAACTATTT AATGGCGAAG GCGGCGGTGG CCTTTTGTCA GCAACACACT
CAGACCCATG TAGATGTGGC GATTACCAAT ACCCAAGATG TTATCCAATC GGTCGCGCAA
TTTCGCGCCG AAATGGGCTT TATCGAAGGG CATTGCACCG ATAACCGCTT GAATATTGAG
CCATGGCATA AGGACAGGTT ATTGGTCTTT TGCCATCCCG CCCATCCTCT CGCGGGGCAA
ACGGTCAAAC CCGTTGAGGT CAAAGGCCTA TCATGGGTAC TCAGGGAGGA AGGCTCGGGT
ACGCGGGAGT ATTTTGTTAA TGCTGCCAAT GAATTAGGAA TGCAGCCCGA GGCGAAGTTT
TGTTTTACTA CCCCCGATGC TATCAAGCTT GCGGTAAAAC AAGGGGCGGG ACTTGGCGTG
CTCTCTGAAT TGGCGCTGGA TAAAGACATC AGCCGAAAAG AGTTAGCCCT AGTCACCATC
GAAGGCTTAG TGCTAGAGCG TCAGTTTTAC CGCATCACCC ATAAGAGCCG TCAAGCAACC
TCGCTAGGAT CGGCCTTTGT GCAGTTTTGC AGTAATTTTT TTCATTTATC TCGGGAATTA
ACGGCGCAAC GTTAA
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| Protein sequence | MRITLRQLAV FEAVARSGQV AKAAEQVNLS PPATSMALAE LEKQLNARLF ERIGNRLQLN
SQGNLLLPLA TDLLHRVEQI EQAFTRQDGD LVGHLSVSAS STIGNYLMAK AAVAFCQQHT
QTHVDVAITN TQDVIQSVAQ FRAEMGFIEG HCTDNRLNIE PWHKDRLLVF CHPAHPLAGQ
TVKPVEVKGL SWVLREEGSG TREYFVNAAN ELGMQPEAKF CFTTPDAIKL AVKQGAGLGV
LSELALDKDI SRKELALVTI EGLVLERQFY RITHKSRQAT SLGSAFVQFC SNFFHLSREL
TAQR
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