| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2153 |
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| Symbol | |
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| ID | 4252726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2577100 |
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| End bp | 2578620 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118777 |
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| Product | flavocytochrome c |
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| Protein accession | YP_734283 |
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| Protein GI | 113970490 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0615938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAT ATGATCTGCT AGGACGCCGT AATTTTATTA AAGGCTTGGG TGCCGCTACA
GGTGTTGCAA TTGCAGCACC TGCTATGGCG TTATCAGAAA AGGCCGACGG TGTTAAATGG
GATAAAGAAG TTGAAGTGCT AATTGTGGGA TCTGGTTTTG CAGGATTGGC TGCAGGTATA
GAGGCTATTC GCAAAGGCGC TAAAGATGTA CATATATTTG AAAAAATGTC TTATTTCGGT
GGTAACTCTG CAATTAACGG CGGTTTATTC GCGGCACCTG GGACGCCAAT GCAGAAAAAA
GAAGGCATTG ATGATTCAGT TGAAAAAATG GTAGCAGATC AAATTGCATC TGGCCGCGGT
ATTGCGGACG AGAGCTTATT ACGGCATGTG GCTTCACATG CTGTAGAGGC GCTGCAAATG
ACGTTAGATG CAGGAGCTGA ATTTCATCCA TATTTGCAGC AACTGGGTGG TCATTCCGTT
GCTCGAACTT ACCAAACGAG TGTGAGTTGT GGTGCCGGTA TTACTCAACC TCTGCTAAAA
GAGTGCCGCA GGCTAGGTGT AAAGACCCAT AACCGCGCTA AGTTTGAAGG TTTCATTCTG
GGGGGGAAGG GAAATGTTGT CGGTGTGAAA ATGCGCGAAA ACTATCACTT TGCTGAAGAT
CAACCAGGGA AGGTTGTTAA TATTCGAGCA TTGCGAGGCG TGCTTATGGC GACCGGCGGC
TTTGCGCAGA ATATCGATTT TCGGATGGCG CAAGATCCGA CGCTAACCTC TGAAGTAGGC
TGTACCAATG CGCCTGGCGC GACGGGTGAG GGCATGTTGG AAATGTTCCG CTTAGGGGCA
GTGCCTGTCC ACCTTGCCCA TATCCAATCT GGGCCATGGG CTTCGCCCGA TGAAGGCGGC
TTTGGCTATG TATCTAATTA TTCGATTTTT AACTTCCCTC ATTCAATTGC GATTAACTGT
ATGACTGGTA AACGCTTTAT GGATGAGATT GCGGACCGGA AAACACGAGC CGATGCGGAG
TTGGCATGTC GTGATGCTAA AGGTGAACCG CTACCACCCA TTTTAATTAC GAGTTTTAAA
GACTCTAAGC AGCATCCTAA TACTGCCAAA GTGCTTAAAT ATAATGTGGG TTGGAAGTTC
GATACTCTTG AGGCGTTAGC GAAACACTTT GGCATACCAA TCGAGCCATT AAAAGCGCAG
ATTGAAGAAT ATAACAGCTA TGTCAAAACG GGCGTTGATA AGCAATTTAA CAAGAATATG
ACAAAAGCCA AGGATAAATA TATTGAAGCG CCATTTACCG TAGTTCGTCT ATGGCCAAAA
GTGCATTACT GCCAAGGTGG TGTGCAGGTC AATACTAAGG CACAAGTGAA AGACAGCTTT
ACGGGTCAAC CTATCCCAGG TTTGTATGCT GCAGGTGAAG TCTGTGGTGG TATTCACGGT
GTTAGCCGTC TGGGGAGCTG CTCAATTCCA GAATGTATGG TGATGGGTAT GACAGCCGCC
CGCAGCATGA TGCAAGCCTA A
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| Protein sequence | MRKYDLLGRR NFIKGLGAAT GVAIAAPAMA LSEKADGVKW DKEVEVLIVG SGFAGLAAGI
EAIRKGAKDV HIFEKMSYFG GNSAINGGLF AAPGTPMQKK EGIDDSVEKM VADQIASGRG
IADESLLRHV ASHAVEALQM TLDAGAEFHP YLQQLGGHSV ARTYQTSVSC GAGITQPLLK
ECRRLGVKTH NRAKFEGFIL GGKGNVVGVK MRENYHFAED QPGKVVNIRA LRGVLMATGG
FAQNIDFRMA QDPTLTSEVG CTNAPGATGE GMLEMFRLGA VPVHLAHIQS GPWASPDEGG
FGYVSNYSIF NFPHSIAINC MTGKRFMDEI ADRKTRADAE LACRDAKGEP LPPILITSFK
DSKQHPNTAK VLKYNVGWKF DTLEALAKHF GIPIEPLKAQ IEEYNSYVKT GVDKQFNKNM
TKAKDKYIEA PFTVVRLWPK VHYCQGGVQV NTKAQVKDSF TGQPIPGLYA AGEVCGGIHG
VSRLGSCSIP ECMVMGMTAA RSMMQA
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