| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2132 |
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| Symbol | |
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| ID | 4252705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2546592 |
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| End bp | 2547863 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118756 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_734262 |
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| Protein GI | 113970469 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAT CTATAAACAC CAGCAGCCAC ACGAGCAGCG TGAGCGAGGC GGGAAACGGT
AATTATCGTT TTGCGTTAGT CTCATTGACC TCACTGTTTT TTATGTGGGG CTTTATTACT
TGTCTGAACG ATATTCTGAT CCCTCATCTT AAGGCGGTGT TTTCACTCAA TTACACCCAA
GCGATGTTGA TCCAGTTCTG CTTCTTTGGC GCCTATTTTC TGGTGTCGAT TCCGGCGGGG
CAGTTAGTGA AACGACTCGG TTATCAAAAA GGCATAGTCA CAGGCTTAGT GATTGCAAGT
ATCGGCTGTG GTTTGTTCTA TCCTGCCGCG TCCTTTGCGA CCTACGGATT ATTCCTCGGC
GCTTTGTTTG TATTGGCCTC TGGGATCACA ATATTACAAG TAGCGGCTAA CCCCTATGTT
AACGCGCTTG GCAGCAGTGA AACCGCATCG AGCCGCTTAA ACCTGACTCA AGCTTTCAAC
TCTTTAGGGA CGACGGTCGC GCCATTTTTT GGCTCGATTT TGATTCTTTC AGTGGCGACA
ACAGCATCTT CTGAATTAGC GCAAGCCAAT GCCGAGGCGG AAGTGGTCAA GCTGCCGTAC
TTAATGTTAG CTGCAGCCCT TGCCGTACTC GCGGTGATTT TCGCTAAGCT AGACTTGCCA
GTGATCCGTG AACATAGCGA AGCCGCGTCG GGCGAAGTGC AAAGCCATTT AGGCAAAACC
AGCGCGCTGC AAAGCACCCA TTTGGTGTTA GGTGCGGTGG GGATTTTTGT TTATGTGGGC
GCAGAAGTGT CTATTGGTAG CTTCTTAGTC AACTTCCTCG GCGAATCACA TATCGTCGGC
ATGCCAGAAG AGCAAGCGGC CCATTACATC GCCTATTACT GGGGCGGCGC TATGGTCGGG
CGCTTTATCG GTTCGGCGGT AATGCAAAAA ATCCCTGCTG GCACAGTGCT GGCTTTCAAT
GCCTTGATGG CGGCATTGTT GGTGCTGGTT GCGATCACCA GCAGTGGCAC GCTGGCAATG
TGGGCGATTT TGGGCGTGGG ATTATTTAAC TCGATTATGT TCCCCACTAT TTTCAGCTTA
GCGCTGCGTG ACCTAGGTCC GCACACGTCG CAGGGTAGCG GTATTCTCTG TTTAGCCATT
GTGGGTGGTG CGATTGTGCC ATTGTTGCAA GGGGTGTTGG CTGATAACTT AGGCATTCAA
TTGGCCTTTA TTCTGCCTGT GGTGTGCTAC GGTTTTATTC TGTTCTATGG GGCGAAAGGC
TCTAAGATGT AA
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| Protein sequence | MASSINTSSH TSSVSEAGNG NYRFALVSLT SLFFMWGFIT CLNDILIPHL KAVFSLNYTQ
AMLIQFCFFG AYFLVSIPAG QLVKRLGYQK GIVTGLVIAS IGCGLFYPAA SFATYGLFLG
ALFVLASGIT ILQVAANPYV NALGSSETAS SRLNLTQAFN SLGTTVAPFF GSILILSVAT
TASSELAQAN AEAEVVKLPY LMLAAALAVL AVIFAKLDLP VIREHSEAAS GEVQSHLGKT
SALQSTHLVL GAVGIFVYVG AEVSIGSFLV NFLGESHIVG MPEEQAAHYI AYYWGGAMVG
RFIGSAVMQK IPAGTVLAFN ALMAALLVLV AITSSGTLAM WAILGVGLFN SIMFPTIFSL
ALRDLGPHTS QGSGILCLAI VGGAIVPLLQ GVLADNLGIQ LAFILPVVCY GFILFYGAKG
SKM
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