| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2128 |
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| Symbol | asnC |
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| ID | 4252701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2540089 |
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| End bp | 2541489 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118752 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_734258 |
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| Protein GI | 113970465 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000132176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTG CATCGGTCGC TTCTGTATTT AAAGGTGAGC ACGCAGTTGG TTCGACAGTC
ACAGTCCGTG GCTGGGTCAG AACCCGTCGT GACTCTAAAG CTGGCATCTC TTTTTTAGCT
GTCTATGACG GCTCCTGCTT TAATCCTATC CAAGGTGTTG TGCCAAATAG CTTAGAAAAT
TACGACAACG AAGTGTTAAA GCTGACAGCT GGCTGCTCTG TGATCGTAAC CGGTGAGATT
GTGGAATCTC CTGGCGCTGG CCAAGCCTAC GAGCTGCAAG TCACACAAGT TGAAGTGACA
GGCTGGGTTG AAGATCCAGA CACTTACCCA ATGGCGGCTA AGCGTCACTC AATCGAGCAT
TTACGCGAAC TGGCCCACTT ACGCCCACGT ACCAACATCA TTGGTGCCGT TGCCCGCGTG
CGTAACTGTT TGTCTCAAGC GATTCACCGT TTCTACCACG AAAATGGTTT CGTGTGGGTG
TCTACACCGC TGATCACCGC ATCAGACTGT GAAGGCGCGG GTGAAATGTT CCGTGTCTCC
ACACTGGATA TGGAAAACCT GCCACGCACC AGCGACGGCA AAGTAGACTA TGACAAAGAC
TTCTTCGGTA AAGAGGCATT CTTAACCGTA TCGGGCCAGC TGAACGGCGA AACCTACGCC
TGCGCCCTGT CAAAAATCTA TACCTTTGGC CCGACGTTCC GTGCTGAAAA CTCAAACACC
AGCCGCCACT TAGCGGAATT CTGGATGGTT GAGCCAGAAG TGGCGTTCGC GACCTTAAGC
GATATCGCAA ACCTTGCCGA AGGCATGCTG AAATACGCCT TTAACGCCGT ATTAGCTGAG
CGTATGGACG ATTTACAATT CTTCGCCCAG CACGTAGATA AAACTGTGAT TGAGCGTCTG
CAGTCTTTCG TATCGAGTGA TTTCGCCCAA GTGGATTACA CCGATGCGGT TGAGATCCTG
CAAAAATGTG GTCGTGAGTT CGAATTCCCA GTGTCTTGGG GTATCGACTT ATCCTCTGAG
CACGAGCGTT ATCTGGCCGA GGAGCACTTC AAAGCCCCCG TGGTTGTGAA GAACTATCCA
AAAGATATCA AAGCTTTCTA CATGCGCCTC AACGAAGACG GTAAAACCGT TGCCGCGATG
GACGTATTAG CCCCAGGCAT CGGTGAAATC ATCGGTGGTT CACAACGTGA AGAGCGTTTA
GACGTACTGG ATATGCGTTT AGAAGAAATG GATCTGAACA AAGAAGATTA CTGGTGGTAC
CGCGATCTGC GCCGTTACGG CACAGTTCCA CACGCAGGTT TCGGTCTGGG CTTCGAGCGT
TTAGTGTCTT ACGTGACGGG CGTATCGAAC ATCCGTGACG TGATCCCATT CCCACGCGCG
CCTCGCACTG CGAACTTCTA A
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| Protein sequence | MSIASVASVF KGEHAVGSTV TVRGWVRTRR DSKAGISFLA VYDGSCFNPI QGVVPNSLEN
YDNEVLKLTA GCSVIVTGEI VESPGAGQAY ELQVTQVEVT GWVEDPDTYP MAAKRHSIEH
LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHENGFVWV STPLITASDC EGAGEMFRVS
TLDMENLPRT SDGKVDYDKD FFGKEAFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFATLS DIANLAEGML KYAFNAVLAE RMDDLQFFAQ HVDKTVIERL
QSFVSSDFAQ VDYTDAVEIL QKCGREFEFP VSWGIDLSSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDMRLEEM DLNKEDYWWY
RDLRRYGTVP HAGFGLGFER LVSYVTGVSN IRDVIPFPRA PRTANF
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