Gene Shewmr4_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2125 
Symbol 
ID4252698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2537561 
End bp2538964 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content51% 
IMG OID638118749 
Productaminodeoxychorismate synthase, subunit I 
Protein accessionYP_734255 
Protein GI113970462 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0147] Anthranilate/para-aminobenzoate synthases component I 
TIGRFAM ID[TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0898059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA GGGCGGCATT ACCGCTGGCA GTACGCCAAC TTGACTGGAC TTTCAGCACA 
GCAGCAATCT TCGAACACTT TGCGGCTGAA CCTTGGGCGA TACTGCTCGA CTCGGCCAAT
GCGTCCCATC AGGACGCTAA ATTCGATATG ATTTGCGCAG GTCCCATCGC CACCCTCATC
ACCCAAGGCG AGCTGACTGA CATTCAAGTT CATCAGCCTG AATTAGCCAA ACCGACTCAC
CTCAGCCCGC AGGATGACCC TTTTACCCTG GTCAAACAGC TGCTGCGCCA TTGGTATCCA
CACTCTTTTG CCTGCGATTT GCCCTTTAGT GGCGGCGCCA TGGGCAGCTT TAGTTATGAT
TTAGGCCGTC GAATTGAGCA GCTCCCCTGC ACTGCGGCGC AGGATATTCA CCTCGGCGAG
ATGAATATTG GCTTTTACGA CTGGGCATTG ATTTTCGATT ATCAGCAGCA AAGCTGGTTT
TTAGTGCACT ATTTGGGTGA TGCCGCCCTC GATACTCAAT TGAAAATAAT TGAATCTAAA
ATAGCCAAAG CCACAAAACA GGCCGAATTT AATCTCACAA GCCCTTGGTC ATCGCAACTC
ACCAAAGCCA AGTACATTTC AAAATTCAAT GAAGTACAGG CATATCTGCA TAGCGGCGAT
TGCTATCAAA TTAATTTGAC CCAGCGCTTT GAAGCAGAGT ATCAAGGCGA TGAATGGCGC
GCTTACTGCA AGCTACGAAG TGCCAATCAA GCGCCCTTCT CCGCCTTTAT GCGGCTTGAT
GCCAACGCGA TTTTATCGAT TTCGCCCGAG CGTTTTATTC AGCTGCACGG TGACGATATT
CAAACCAAAC CGATTAAAGG CACGCTGCCG CGCCATAGCG ACCCGATGCT AGATAAGCGA
GCAGCGCAAG CCCTTGCCCA TTCACCCAAG GATCGCGCCG AAAACGTGAT GATTGTGGAT
TTACTGCGCA ATGACATAGG TAAAGTCGCC GCGCCCGGCA CTGTACAAGT GCCACATCTA
TTTGCCGTCG AAAGCTTTCC TGCGGTGCAC CATTTAGTCA GTACCGTTAC CGCCAAACTC
GACCCACAAT ACCACGCCTG TGACTTACTG CGCGCAGCCT TTCCCGGCGG TTCAATAACC
GGAGCGCCTA AAATCCGCGC CATGGAAATT ATTGAAGAGC TGGAACCCTC ACGCCGCAGT
CTGTATTGTG GCTCCATGGG TTACATCAGC CAAGATGGGC AAATGGATAC TAGCATCACC
ATTCGCACTA TCGTGGCTGA GCAAGGTAAA CTCTATTGCT GGGCGGGCGG CGGCATAGTC
GCGGACTCTA ATGTCGATGC CGAGTACCAA GAAAGCTTCG ATAAGATAAG CCGTATCTTA
CCCTTACTCG ATAGCCCTCA ATAA
 
Protein sequence
MANRAALPLA VRQLDWTFST AAIFEHFAAE PWAILLDSAN ASHQDAKFDM ICAGPIATLI 
TQGELTDIQV HQPELAKPTH LSPQDDPFTL VKQLLRHWYP HSFACDLPFS GGAMGSFSYD
LGRRIEQLPC TAAQDIHLGE MNIGFYDWAL IFDYQQQSWF LVHYLGDAAL DTQLKIIESK
IAKATKQAEF NLTSPWSSQL TKAKYISKFN EVQAYLHSGD CYQINLTQRF EAEYQGDEWR
AYCKLRSANQ APFSAFMRLD ANAILSISPE RFIQLHGDDI QTKPIKGTLP RHSDPMLDKR
AAQALAHSPK DRAENVMIVD LLRNDIGKVA APGTVQVPHL FAVESFPAVH HLVSTVTAKL
DPQYHACDLL RAAFPGGSIT GAPKIRAMEI IEELEPSRRS LYCGSMGYIS QDGQMDTSIT
IRTIVAEQGK LYCWAGGGIV ADSNVDAEYQ ESFDKISRIL PLLDSPQ